<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP08388

Description Uncharacterized protein
SequenceMLNKYFYIWIAVSPQYTGERINSNICKADRWILTEGHLHDVGDEVCALLVTICMIADYTKHKLRDRYSDEKIRIKWDNSVLFVFSGKSMDQRAFRREYIAELSKGVLMAMCEQEWVTQRIYRRCEDGAMDCFSSHQLRKNCLGQQLLRMALRRRSEREIVRELTICNGNSKKSLIDKLLNVLNIWNTRATYFDFKLMIREVQNFGICSGYLYYFLID
Length217
PositionKinase
OrganismOnchocerca flexuosa
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Nematoda> Chromadorea> Rhabditida> Spirurina> Spiruromorpha> Filarioidea> Onchocercidae> Onchocerca.
Aromaticity0.12
Grand average of hydropathy-0.275
Instability index37.48
Isoelectric point8.93
Molecular weight25775.67
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP08388
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      77.38|      23|      25|      21|      44|       1
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    9-   23 (18.39/ 8.95)	........WIAVSPQY...TGERINS
   24-   47 (39.78/33.13)	NICK.ADrWILTEGHLHD.VGDEVCA
   51-   70 (19.21/10.01)	TICMiAD.Y..TKHKLRDrYSDE...
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      81.33|      24|      29|      91|     114|       2
---------------------------------------------------------------------------
   91-  111 (32.91/17.28)	......QRAFRR....EYIAE..LSKGVLMAMC
  112-  141 (28.46/14.21)	EQEwvtQRIYRR...cEDGAMdcFSSHQLRKNC
  143-  166 (19.96/ 8.36)	GQQ.llRMALRRrserEIVRE..LT......IC
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP08388 with Med12 domain of Kingdom Metazoa
Unable to open file!