<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP08315

Description Uncharacterized protein
SequenceLKHITTYWLISPLVHACPRPGNVPASFPAITVQAKFLKEAAAMLDTSTDNSKERIQQSLDELKTDFCLKLLRDLIKQKRHLRIAWLLSQETFLNLVLTCLNGEEQQRDGLVGSLLKQLQDLAAKAKDNPLLPYLRKFSLEREGVLLRLSLVGGMFDSVCHPSNCDAWALTLFQLMLYGVVSRERDRYLFDSCYDMLSTLLVWSITDPMNAVPVNAQDPDTKFRFANYSLIVKKLRVCNSFASYSQKELNERALIPELRSLMQFLPIPKPQFELITCEPYGTVPTSPQKLGKSQSQGQITQTTIKANRHGLQHIFLSFLILYLFVSELQAVKLDRFPIPIQRYIQRLVHHSHYNEFVRPTICGMDRPPNLDIYLSPPMMDVSETPATLHHVSSSTATSTTTSAASSTNVPVSTAMDMGAALGPMAQGRALGYQPGGNTPGCAPPGADASAPGGASGGAAAIMFPGQTGPMAALPDLTERGQTSASPRGARGGRRKTTGLSTRSQGTTRKQRQQRQQTVDQAAVAAAAAVAAMQQQQQQQQQQQMAGSGPPPQASYPDSWTVTGAQQPGGPQQFASGPAGAGQPGKPFVSFMRFC
Length593
PositionKinase
OrganismGongylonema pulchrum
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Nematoda> Chromadorea> Rhabditida> Spirurina> Spiruromorpha> Spiruroidea> Gongylonematidae> Gongylonema.
Aromaticity0.07
Grand average of hydropathy-0.264
Instability index45.31
Isoelectric point9.26
Molecular weight64757.45
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP08315
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      84.32|      22|      22|     422|     443|       1
---------------------------------------------------------------------------
  422-  442 (35.06/15.20)	.PMAQGR.ALGYQPGGNTPGCAP
  443-  459 (24.09/ 8.24)	P......gADASAPGGASGGAAA
  473-  491 (25.17/ 8.93)	PDLTERG.QTSASPRGARGG...
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     118.49|      41|      50|      56|      97|       2
---------------------------------------------------------------------------
   56-   97 (64.47/45.34)	QQSLDELKTDFcLKLLRDLI.KQKRHLRIAWL..LSQET...FLNLVL
  104-  150 (54.02/32.30)	EQQRDGLVGSL.LKQLQDLAaKAKDNPLLPYLrkFSLERegvLLRLSL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.20|      12|      49|     358|     369|       3
---------------------------------------------------------------------------
  358-  369 (24.23/14.44)	PTICGM.DRPPNL
  375-  387 (17.97/ 8.84)	PPMMDVsETPATL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.11|      13|      21|     509|     529|       4
---------------------------------------------------------------------------
  509-  521 (23.25/22.49)	QRQQRQQTVDQAA
  532-  544 (24.85/ 7.76)	QQQQQQQQQQQMA
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP08315 with Med12 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ETPATLHHVSSSTATSTTTSAASSTNVPVSTAMDMGAA
2) GPMAQGRALGYQPGGNTPGCAPPGADASAPGGASGGAAAIMFPGQTGPMAALPDLTERGQTSASPRGARGGRRKTTGLSTRSQGTTRKQRQQRQQTVDQAAVAAAAAVAAMQQQQQQQQQQQMAGSGPPPQASYPDSWTVTGAQQPGGPQQFASGPAGAGQPGKPFVSFM
382
421
419
590










Molecular Recognition Features






MoRF SequenceStartStop




NANANA