<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP08245

Description Uncharacterized protein
SequenceMMNQMGMMMQQQGVGVPGGPGGVGGVGMPGPGGVGVPSGMMQSPQMQQAQQQQQVQQQQQQQQVQQQQVQQQQQQQQQQQQQQQQQQQHSQSAQQQAQQTEKVDNISKVKVLVGPLRDALSTTIKTAAQLIQQNTLADAGSKTVDLNNAPRFDKHLEEFYSICDQIELNLKTAKLCMQQCTSSQQYLPIPVATSQPPLAETNALTYNQYLEVVKLQIGYAKDIHDTLICAAQNISPSE
Length238
PositionTail
OrganismAnopheles stephensi (Indo-Pakistan malaria mosquito)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Culicoidea> Culicidae> Anophelinae> Anopheles.
Aromaticity0.03
Grand average of hydropathy-0.712
Instability index70.23
Isoelectric point5.56
Molecular weight26184.14
Publications
PubMed=25244985

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP08245
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      71.85|      17|      17|      52|      68|       1
---------------------------------------------------------------------------
   52-   68 (35.45/ 8.25)	QQQVQQQQQQQQVQQQQ
   70-   86 (36.40/ 8.66)	QQQQQQQQQQQQQQQQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.04|      18|      45|     118|     135|       2
---------------------------------------------------------------------------
  118-  135 (31.00/16.84)	DALSTTI..........................KTAAQLIQQNT
  138-  181 (20.04/ 8.77)	DAGSKTVdlnnaprfdkhleefysicdqielnlKTAKLCMQQCT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      32.59|       9|      46|      42|      51|       3
---------------------------------------------------------------------------
   42-   51 (14.64/ 8.73)	QSPQmQQAQQ
   91-   99 (17.96/ 6.07)	QSAQ.QQAQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.45|      12|      17|       8|      19|       4
---------------------------------------------------------------------------
    8-   19 (25.44/10.85)	MMQQQGVGVPGG
   28-   39 (26.01/11.23)	MPGPGGVGVPSG
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP08245 with Med29 domain of Kingdom Metazoa
Unable to open file!