<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP08232

Description Uncharacterized protein
SequenceMSGQFPGGYQSPSGHRGNYNSPIIQQHLNQMNVPNQMGMMGFNQNNVMNNPQMQGVPGQGNQDMGLNAGMMQQNAQQQQQQQQAAQGMQPNPQQIPVNQHQQGQNQMVGQNPSHQANQPTPQMGMQQPGGNVGPGNVMNNPQAQNQSVPPNQPGGGGTTVQQQQKAEFNLLSLCRIGQETVQDIVSRFQEVFGILRSIQPPNGTNQGQLSSNDKKAKVQEQFRTIRLLFKRLRLLYDKCNDNCQQGMEYTHVESLIPLKGEIERTEPVHTEEYKKALQENRELVAMVQLKNKQLREIIDKIRLTIWEINTMLSMRRC
Length317
PositionHead
OrganismAnopheles stephensi (Indo-Pakistan malaria mosquito)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Culicoidea> Culicidae> Anophelinae> Anopheles.
Aromaticity0.04
Grand average of hydropathy-0.920
Instability index49.28
Isoelectric point9.08
Molecular weight35647.83
Publications
PubMed=25244985

Function

Annotated function 
GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP08232
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     109.15|      22|      23|     109|     130|       1
---------------------------------------------------------------------------
   41-   60 (31.44/ 7.70)	GFNQNNVM...NNPQMQ.GV..PGqG
   87-  108 (28.66/ 6.36)	GMQPNPQQipvNQ..HQQG.QNQM.V
  109-  130 (49.05/16.21)	GQNPSHQA...NQPTPQMGMQQPG.G
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      70.71|      19|     115|      17|      38|       4
---------------------------------------------------------------------------
   17-   38 (35.08/22.16)	GN.YNSPiiqQHLNQMNVPNQMG
  135-  154 (35.64/15.82)	GNvMNNP...QAQNQSVPPNQPG
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP08232 with Med30 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) MSGQFPGGYQSPSGHRGNYNSPIIQQHLNQMNVPNQMGMMGFNQNNVMNNPQMQGVPGQGNQDMGLNAGMMQQNAQQQQQQQQAAQGMQPNPQQIPVNQHQQGQNQMVGQNPSHQANQPTPQMGMQQPGGNVGPGNVMNNPQAQNQSVPPNQPGGGGTTVQQQ
1
163










Molecular Recognition Features






MoRF SequenceStartStop




NANANA