<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP08135

Description Uncharacterized protein
SequenceMSFSSDEVNFLVYRYLQESGFSHSAYTFGIESHISQSNINGALVPPAALLSILQKGLQYTEAEISIGEDGTEQRLGESLSLIDAVMPEVVANRQNMQNQQKQATKTEPPETNGTTEEPAPPPPTTTTTATTTPAPVETMEVDQSIEIPASKATVLRGHESEVFICAWNPSTDLLASGSGDSTARIWDMSDNPANPNQLVLRHCIQKGGTEVPSNKDVTSLDWNCDGTLLATGSYDGYARIWRTDGLLASTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAATGQCTQQFSFHSAPALDVDWQSNQSFASCSTDQCIHVCKLGVDKPIKSFQGHTNEVNAIKWDPQGQLLASCSDDMTLKIWSMKQDTCAHSKEIYTIKWSPTGTGTQNPNMNLILASASFDSTVRLWDVERGVCIHTLTKHTEPVYSVAFSPDGKFLASGSFDKCVHIWSTQSGQLVHSYKGTGGIFEVCWNSRGSKVGASASDGSVFVLDLRKL
Length499
PositionTail
OrganismAnopheles melas
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Culicoidea> Culicidae> Anophelinae> Anopheles.
Aromaticity0.08
Grand average of hydropathy-0.330
Instability index43.75
Isoelectric point5.25
Molecular weight54286.05
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP08135
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             8|     441.00|      40|      40|     399|     438|       1
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  136-  171 (25.99/10.17)	.........VETME................VDQSI..EIPAskatvLRGHESEVFICAWNPST
  174-  226 (49.03/25.12)	LASGSGDSTARIWDmsdnpanpnqlvlrhcIQKG.....GT.....EVPSNKDVTSLDWNCDG
  229-  267 (62.44/33.81)	LATGSYDGYARIWR................TD.GL..LAST.....LGQHKGPIFALKWNKRG
  271-  309 (54.72/28.81)	L.SAGVDKTTIIWD................AATGQ..CTQQ.....FSFHSAPALDVDWQSNQ
  311-  350 (55.91/29.58)	FASCSTDQCIHVCK................L..GVdkPIKS.....FQGHTNEVNAIKWDPQG
  353-  387 (58.11/31.00)	LASCSDDMTLKIWS................MKQDT..C..........AHSKEIYTIKWSPTG
  399-  438 (67.48/37.08)	LASASFDSTVRLWD................VERGV..CIHT.....LTKHTEPVYSVAFSPDG
  441-  479 (67.31/36.97)	LASGSFDKCVHIWS................TQSGQ..LVHS.....Y.KGTGGIFEVCWNSRG
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP08135 with Med16 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) VVANRQNMQNQQKQATKTEPPETNGTTEEPAPPPPTTTTTATTTPAPVETMEVDQSIEIPASKA
89
152










Molecular Recognition Features






MoRF SequenceStartStop




1) FLVYR
10
14