<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP08114

Description Uncharacterized protein
SequenceMGAEPETSLFGSFETRYGMRTKVQEKKGKMSTDEQQQQQNQIPNIAGTILIGGIGGGLDGGQHKQQQQQQQQQQAQSQHNPHQQQQQHHLHSYSHILPHLHQFSTMTGSNPASLTGGSKLPAKSSPLGPSPFRQLLPVTLCIISFATVLSILIIYMDTTEIRHQQFRLNMSRDYDLMGVPQDNPALVKYVRDIHMKKYPMTFMRNANAPVEQLNFTNRHELTPEMAHLISDLLGRKRFGTFFQSLTGNSDSMMTAPWLAETMNWGGYLVEPDPRKYFSLRKQNAFRSNVQVIHACLSPNTYPKEVTLHHDDDSEVQINSVLDEETEWFHPRVKCFPVYTLMLAVNRTSIDLLSLGCHGQELQILQTIPFDRVHIKVISIHLVHYFEEDEMMIDVDEYVQSIGRFLMSKSYKLVRSMDRNFIYQHLSVLSAAKQRQRQQQQQQSFSVADHMLASSQQHQQQQHPVPARSNAISSGEKPDATMAIRKGQEISSNSGKIPIPLSSAATTTPAPATTTSTTAAPSSTAASATDSSERFDKLMLLRGGDSEPFDASDSEFAGSSDSSAMETGSDSEDEAQQQQQAEQDKPAEVVDLEQMVSLMEPLDETELEDGSVRVAGSSSPPPMVTSLK
Length627
PositionHead
OrganismAnopheles melas
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Culicoidea> Culicidae> Anophelinae> Anopheles.
Aromaticity0.06
Grand average of hydropathy-0.562
Instability index61.63
Isoelectric point5.75
Molecular weight70027.78
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP08114
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     293.60|      68|     367|      62|     131|       1
---------------------------------------------------------------------------
   24-   61 (44.21/24.53)	........QEKKGK....M..STDEQQQQQNQI.......PNIAG..TILIGGIG.GGLD..GG.........................
   64-  131 (123.65/66.44)	KQQQQQQQQQQAQS....Q..HNPHQQQQQHHLHSYSHILPHLHQF.STMTGSNP.ASLT..GGS.KLPAKSS....PLG......PSP
  432-  510 (71.47/33.97)	KQRQRQQQQQQSFSvadhMlaSSQQHQQQQHPVPARSNAISS.........GEKPdATMAirKGQ.EISSNSGkipiPLSsaatttPAP
  567-  619 (54.27/25.76)	............GS....D..SEDEAQQQQQAEQDKPAEVVDLEQMvSLMEPLDE.TELE..DGSvRVAGSSS....P...........
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      41.71|      13|      24|     287|     300|       2
---------------------------------------------------------------------------
  287-  300 (20.15/22.05)	SNVQvIHACLSPNT
  313-  325 (21.56/16.90)	SEVQ.INSVLDEET
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      88.92|      21|      37|     184|     204|       3
---------------------------------------------------------------------------
  152-  172 (19.24/ 9.06)	..LIIYMdtTEIRHQQFRLNMSR
  184-  204 (36.85/23.49)	PALVKYV..RDIHMKKYPMTFMR
  223-  243 (32.83/20.20)	PEMAHLI..SDLLGRKRFGTFFQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      32.78|      11|      22|     345|     357|       5
---------------------------------------------------------------------------
  345-  357 (13.64/17.11)	NRTSIDLLSLgcH
  370-  380 (19.14/12.46)	DRVHIKVISI..H
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP08114 with Med30 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GIGGGLDGGQHKQQQQQQQQQQAQSQHNPHQQQQQHHLHSYS
2) MGAEPETSLFGSFETRYGMRTKVQEKKGKMSTDEQQQQQNQIPNIA
3) RQQQQQQSFSVADHMLASSQQHQQQQHPVPARSNAISSGEKPDATMAIRKGQEISSNSGKIPIPLSSAATTTPAPATTTSTTAAPSSTAASATDSSERFDKLMLLRGGDSEPFDASDSEFAGSSDSSAMETGSDSEDEAQQQQQAEQDKPAEVVDLEQMVSLMEPLDETELEDGSVRVAGSSSPPPMVTSLK
53
1
436
94
46
627










Molecular Recognition Features






MoRF SequenceStartStop




1) LMEPL
597
601