<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP08093

Description Uncharacterized protein
SequenceMGGIPVPLRQGMSPISPATPGGSMRVPTPQGSCPLPYPSPLGGPAGSPNPMGSLNFRRATPLLPPPPYDVAIASPANSVATPSSYHSKQFPLDGVDSSGGPGSNRGPMTPSSTGPLGTTVNPPLSSTGVGCAAGVGPGSVAPGTRSTSIETSALLVNVLLYDTALNIFRDHNFKSCTLCVCNAGTKCVGNIRGADSGLYLALPGTNWMESVTAPADSASASASGGVGNSRSKANTLAHLGLSGSGSAFGGMLGSPAVGGSNSDKTITINTDSLQNGYLDEDPIDCQCGFSAVVNRRMAHRAGLFYEDEMEITGMAEDPAVHKKSSLFEFLNGTAKAIKMEESIGGSGSNGTVATTGGASSTGGASDSLPLTLKVMDLLREQCSVVQSSSNSIHRAVNRYRGALFGRGMENGTVHLLEYVDANDVISLALEQGRLQAINESKMEVDQQQPPSASSSSSSSPGSGALVKGGTLRGIMNVHKWPFLRAGGPKSNQDIVRIMKSMQPLLQDAFHKRCTTRLWDAPYTIQGPLTWRQFHRLAGRGTGQCEPQPIPSLIVGYEKDWLSLAPYALHYWDKLLLEPYSYPRDVAYVAIVPDNDFVVAKVRTYFKELSTTYEMCKLGRHTPIKGWDGILRVGSQRVLKETQNSNLDEWFTNMGVDQQRKNGNSGSSASGLNELLRLYAQTCQQQLAPYLSKVPSDKSLLDPPESHHHTSSSSSASASVSGSGSGSSSGLVGSGSMNQPGGGNGMGQNRGDGPGQSPMPPPPPSTPDSSQPGDKAPNTPKFDH
Length783
PositionMiddle
OrganismAnopheles maculatus
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Culicoidea> Culicidae> Anophelinae> Anopheles> Anopheles maculatus group.
Aromaticity0.06
Grand average of hydropathy-0.364
Instability index45.64
Isoelectric point7.57
Molecular weight81907.87
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP08093
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     249.95|      49|      54|      18|      66|       1
---------------------------------------------------------------------------
   16-   35 (34.16/ 6.39)	S.......................................pATPGGSMRVP.TPQGSCPL
   36-   82 (63.58/17.87)	PYPSPLGGPAGSPNPMG..SLNFRRATPL..LPPPpydvaiASPANS..VA.TP......
   83-  116 (35.65/ 6.96)	................S..SYH.SKQFPLdgVDSS......GGPG.SNRGPmTPSSTGPL
  688-  730 (59.83/16.41)	PYLSKVPSDKSLLDPPE..SHHHTSS.......SS......SASA.SVSGS.GSGSSSGL
  731-  771 (56.74/15.20)	VGSGSMNQPGGG.NGMGqnRGDGPGQSPM..PPPP...............PsTPDSSQP.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     458.31|     102|     102|     239|     340|       2
---------------------------------------------------------------------------
  124-  228 (104.06/48.79)	..................LSSTGVGCAAGVGPGSVAP....................G....TRSTSIETSALlvnvllydtaLNIFRDHNFKSCTlC..............vcnaGTKCV..........GNIRGAD..SGLYLalpgTNWME..SVTAPAD.....S.ASASASG..GVGN
  229-  331 (173.10/86.52)	SRSKAN...TLA.....hLGLSGSGSAFGGMLGSPAV....................GGSNSDKTITINTDSL..........QNGYLDEDPIDCQ.C..................GFSAV..........VNRRMAHR.AGLFY....EDEME..ITGMAED.....P.AVHKKSSLFEFLN
  332-  420 (107.87/50.88)	GTAKAI...KME....esIGGSGSNGTVATTGGASST....................GGASDSLPLTLKVMDL..............LRE.....Q.C....................SVVqsssnsihraVNR...YR.GALF.....G.......RGM.EN.....G.TVH....LLEYVD
  432-  569 (73.28/31.97)	GRLQAInesKMEvdqqqpPSASSSSSSSP...GSGALvkggtlrgimnvhkwpflraGGPKSNQDIVRIMKSM..........QP..LLQDAFHKR.CttrlwdapytiqgpltwrQF...............HRLAGRgTGQCE....PQPIPslIVGYEKDwlslaPyALH..........
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP08093 with Med13 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) LAPYLSKVPSDKSLLDPPESHHHTSSSSSASASVSGSGSGSSSGLVGSGSMNQPGGGNGMGQNRGDGPGQSPMPPPPPSTPDSSQPGDKAPNTPKFDH
2) MGGIPVPLRQGMSPISPATPGGSMRVPTPQGSCPLPYPSPLGGPAGSPNPMGSLNFRRATPLLPPPPYDVAIASPA
3) PSSYHSKQFPLDGVDSSGGPGSNRGPMTPSSTGPLGTTVNPP
686
1
82
783
76
123










Molecular Recognition Features






MoRF SequenceStartStop




NANANA