<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP08085

Description Uncharacterized protein
SequenceMLTRCAATFLRRYCSTSSSSKLAETIASSIEGVDRASIGALLATVPELTKYAPEQWCSTVNLLTTEGLEVEKMLSIIGGHPAILARPPEKIAQSLHCWRSCQFGDANMKVLLSAHPYFLDYTNHGQLAQRVAFLHSHFETRKNVYRLFLNAPNLVVDEHHVTEAKIVYMMQTMRHEVLEVVKSRAFAHDLEHLRCRHTFLERLGLFKPRSLKVDKNTPTGNSPVHQITDTSDKRFAVKVAYVTLEEYEVFQDLFRREMGQDERYEADDEFDAVEVASEPSKSAYRKKGFNQNNVMNNPQMQGVPGQGNQDMGLNPGMMQQNQQQQQQIAQGMQPNPQQIPSNQHQPGQNQMVGQNPSHQSAQPSPQMGMQQSGGNVGPGNVMNNPQSQNQSVPPNQPGGGTTVQQQQKAEFNLLSLCRIGQETVQDIVSRFQEVFGILRSIQPPNGTNQGQLSSNDKKAKVQEQFRTIRLLFKRLRLLYDKCNDNCQQGMEYTHVESLIPLKGEIERTEPVHTEEYKKALQENRELVAMVQLKNKQLREIIDKIRLTIWEINTMLSMRRC
Length560
PositionHead
OrganismAnopheles funestus (African malaria mosquito)
KingdomMetazoa
Lineage
Aromaticity0.06
Grand average of hydropathy-0.627
Instability index43.09
Isoelectric point8.23
Molecular weight63555.45
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP08085
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     117.92|      24|      27|     333|     359|       1
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  297-  320 (28.71/ 8.76)	..NPQM....QGVPGQgNQDMG...LNPGmmQQ
  333-  359 (47.27/23.61)	QPNPQQipsNQHQPGQ.NQMVG...QNPS..HQ
  362-  388 (41.94/15.43)	QPSPQM...GMQQSGG.NVGPGnvmNNPQ..SQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      78.59|      23|      34|      80|     112|       2
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   80-  103 (39.71/42.46)	HPAILA.RPPEKIAQSLHCWRScQF
  115-  138 (38.87/17.42)	HPYFLDyTNHGQLAQRVAFLHS.HF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.13|      17|      56|     146|     162|       3
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  146-  162 (32.20/26.64)	RLFLNAP.NLVVDEHHVT
  202-  219 (24.94/18.84)	RLGLFKPrSLKVDKNTPT
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP08085 with Med30 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) QDERYEADDEFDAVEVASEPSKSAYRKKGFNQNNVMNNPQMQGVPGQGNQDMGLNPGMMQQNQQQQQQIAQGMQPNPQQIPSNQHQPGQNQMVGQNPSHQSAQPSPQMGMQQSGGNVGPGNVMNNPQSQNQSVPPNQPGGGTTVQQQQ
260
407










Molecular Recognition Features






MoRF SequenceStartStop




NANANA