<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP08066

Description Uncharacterized protein
SequenceMMRLPVKIRLEELPNFVIVTRRVSEDEAETANEPPAPSKCVWCQQTLTPNDHPKLLECLHIACHACVKQKITDLSHNSPLMCPVCKMESRLEYIIDNVFLSETSSASGEDNPGSVESTKDQIKCSSCSDDANATSWCVECAEFICDSCVQAHQRLKITKEHTIKPKEAACSEQTSSNGMAGKNIMCHMHPQEKLSLYCETCDRLTCRDCQLLDHRDHKYKFANEIASETRSSLSALLSEISYKKVLLSSAMKVIDDRQAQITEKKKELSKDIADLVVKLTNAVNMRGKQLVYRLNQVCDTKLQVLNEKKEALQLLSGHTDHCIDFVQTALDKGSDSAVLYSKKTLARHLQKVKSQRADIPNPEIPVRVQLYLSNVAELQSVISRIGTILVDGKVYPPSPGPVNGPPGPPGGPVPGPVAPQSRNKQPSPNITPPLRPGMPGPGMTTLSSNGPGGGGGPGGGGGGGGGGGGGGGFSQVPPMYNGNGGVPVGAPFPPNHPMSRSFQQENGPGPGPGFGRFGQMGPPIGMPPQQHVSSSTHPQNMDISLRNLLNQKSSGPPLPPPGTGGTGITVGSGSIHGVGGGSSASGGGGNAGGQHSGGNNANNALANNQFPATANFMGSGVSPGGSGGGPSSHRLSGQLGGPGNFLGGPGGGGHQNFNQPPTGGPPNNPGGMGMGTAAAAAAAAAAARFQSFPRFAMPPSMRHIMGNQNSSTLLTPKQQSLRYPGQPTQPGYSPNSPQPPQLPPQLAGAPVPGSGGGGPGGGSGGGGGGSSGGAKWHIPQNMQTQSNNGFGGPSGLHLFGNGPNESFKIPLKSPDTMRNAMLLNGSGSSGSSLGHGGHGGGSSGGGSSVAGLSSLGGSLHHHHHHHHSQQQQQQQHQNQQHQLQQQQQQQQQQQQQQQQQQQQQHQQQQLHSQQQLQNHLQQLQNALPNVSSTNPKTPSPSTNEPGKDFVESIDKTCEDSVNDLMATIAKLDSNGVQVLPEGHRGKTTSPQVHSSTDLNTSGSSGGGVGSVVVSVSNSSASSVGGSNSNATIVLDDKNLPKDLDPNEDWCAVCMDGGELMCCDKCPKVFHQTCHIPVIDSLPDESETWQCLLCYNFADLPAEPTGEKRNVGITPLELKILQRIVLELFCQYETSMPFRHLEPDTNKAYYDIVRNPISLSIIREKLEMSNNDHYTDIVSFIADVKRLFDNVYLYYQEDSMTYKNARKLEKFFEQQLSKWLPKYLEIDCFSDDYLPNAAKRLKNHQED
Length1246
PositionKinase
OrganismAnopheles farauti
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Culicoidea> Culicidae> Anophelinae> Anopheles.
Aromaticity0.05
Grand average of hydropathy-0.600
Instability index56.77
Isoelectric point6.77
Molecular weight132314.44
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
zinc ion binding	GO:0008270	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP08066
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     114.31|      15|      15|     879|     893|       1
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  863-  877 (31.03/14.36)	HHHHHSQQQQQQQHQ
  879-  893 (32.58/15.39)	QQHQLQQQQQQQQQQ
  895-  909 (31.52/14.68)	QQQQQQQQQQHQQQQ
  912-  925 (19.19/ 6.40)	SQQQLQNHLQQLQN.
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     686.54|     107|     299|     396|     503|       2
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  396-  497 (205.50/56.06)	.............PPSPGPVN.GPPGP.............PGGPV.PGPVAPQS...............RN..KQPSPNiTP.PLR.PGMPGPGMTTLSSNGPGGGGGPGGGGGGGGGGGGGGGFSQVPP.MY....NGNGGVPVGAPFPPNHP
  498-  612 (151.53/38.32)	MSRSFQ....qenGPGPGPGF.GRFGQ.............MGPPI.GMP..PQQhvsssthpqnmdislRNllNQKSS..GP.PLP.P..PGTGGTGITV.GSGSIHGVGGGSSASGGGGNAGG..QHSG.GN....NANNALA.NNQFPA...
  613-  685 (115.54/27.68)	.TANF................mGSGVS.............PGGSG.GG...........................PSSH....RLS.GQLGGPG.NFL........GGPGGGGHQNFNQPPTGG....PP.NN....PGGMGMGTAAAAAAAAA
  686-  803 (149.04/37.59)	AAR.FQsfprfamPPSMRHIM.GNQNSstlltpkqqslryPGQPTqPG.YSPNS.....................PQP...P.QLP.PQLAGAPV.....PG.SGGGGPGGGSGGGGGGSSGGAKWHIPQnMQtqsnNGFGG.PSGLHLFGNGP
  804-  857 (64.93/12.72)	.NESFK............................................................................iPLKsPDTMRNAM.LL..NGSGSSGSSLGHGGHGGGSSGGG..SSVAG.L.....SSLGG............
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      65.92|      18|      40|    1039|    1059|       3
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 1039- 1059 (33.33/29.62)	LPkdlDPNEDW.CAVCMDGGEL
 1081- 1099 (32.60/20.16)	LP...DESETWqCLLCYNFADL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     276.47|      81|     102|     179|     277|       4
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  136-  176 (27.70/ 6.70)	....................WCVECAEFICDSCvqahQRL.KiTKEHTIKPKEAACSEQTSS...............................
  179-  263 (137.08/109.73)	MAGKNIMCHMHP..QEKLSLYCETCDRLTCRDC....QLL.D.HRDHKYKFANEIASETRSSLSALLseisYKKVLLSSAMKVIDDRQAQITE
  285-  361 (111.69/62.18)	MRGKQLVYRLNQvcDTKLQVLNEKKEAL.........QLLsG.HTDHCIDFV.QTALD.KGSDSAVL....YSKKTLARHLQKVKSQRADIPN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.15|      15|      17|     994|    1010|       5
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  994- 1010 (22.04/17.59)	SSTdlNTSGSSGGGVGS
 1014- 1028 (24.11/12.09)	SVS..NSSASSVGGSNS
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.33|      14|      18|     930|     944|      10
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  930-  944 (20.14/15.09)	VSSTNpKTPSPSTNE
  950-  963 (23.19/12.05)	VESID.KTCEDSVND
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP08066 with Med12 domain of Kingdom Metazoa
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