<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP08009

Description Uncharacterized protein
SequenceMISTVAVTLVAAVMACSLLTIGEALPSSGSSSSSSNGGGSRSTSSSSSSNSFPVFGTKRYTRSNLLPSGEYGGQGLSLPVYHMPNGRYYDAQLPPQYFPFAPYAQPSSSDYYDDTGYYGDASKSYYYMPQQPSPHRRYQRNNERYTSYGLPTYRGEYKPTPYYYAHGPSYSYSDDHESSNPLDDLHEEMLQEDERERARDYYPVGQEQWYESPSRQDSAFLRNLILYNSQLQNFGGARGRQLPPLDASNEEDFEEYDDTEPDYEYDSPLADARSGYGSFGFGNGYPGDAAPGAYVPSGASSSSGRMNALSKLNSFRNSMAQNQIDEDDEEVQELKSLIHQQKSSQRLPPMLMDKMAPFVLKQQQQPQQYVPTPAASQKPQPQQQQQQVHQRQSKQQLPQLQPHQQAQQLQREQQLLLQQQQQQQQQRQLQQQQQQLQAQQQLQKEQKQQQLLRTLSSDYQPTYEADNWQKDSPSYNAYDYDADEYDDSWSHWDRKRNVEPKKATFSTTSSATTTTTTTKKPVKVVVSSSTTVAPPSVTVKTGNGQKEVVLPRPTNPRNLFAANLIHAVDETRMQLGTPKADDGSAHQEPKSSKIYDALKAMINMRQDLEKADLREQLEHQKQLAHIHKRFVSNEGSLVEQLDGLKRSA
Length648
PositionTail
OrganismAnopheles dirus
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Culicoidea> Culicidae> Anophelinae> Anopheles.
Aromaticity0.09
Grand average of hydropathy-1.065
Instability index70.90
Isoelectric point5.62
Molecular weight73318.32
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP08009
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     120.35|      19|      19|     379|     397|       1
---------------------------------------------------------------------------
  379-  397 (40.50/13.51)	P..QPQQQQQQVHQRQSKQQL
  398-  415 (26.67/ 6.79)	PqlQPHQQAQQL.QRE..QQL
  417-  433 (25.88/ 6.41)	....LQQQQQQQQQRQLQQQQ
  436-  451 (27.30/ 7.10)	L..QAQQQLQK.EQKQ..QQL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     122.11|      24|      25|      84|     107|       2
---------------------------------------------------------------------------
   86-  115 (39.51/15.46)	GRYYDAQLPP....QYFPFAPYAQPS.ssdyydDT
  116-  142 (27.85/ 8.85)	GYYGDA..SK....SYY.YMP.QQPSphrryqrNN
  143-  169 (28.94/ 9.47)	ERYTSYGLPT.yrgEYKP.TPYYYAH......gPS
  239-  262 (25.80/ 7.69)	GR....QLPPldasNEEDFEEYDDTE.......PD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.66|      14|      15|      28|      41|       3
---------------------------------------------------------------------------
   28-   41 (26.06/16.40)	SGSSSSSSNG..GGSR
   44-   59 (21.60/12.20)	SSSSSSNSFPvfGTKR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.70|      13|      21|     337|     349|       5
---------------------------------------------------------------------------
  337-  349 (24.29/11.87)	LIHQQKSSQRLP.P
  360-  373 (21.41/ 9.47)	LKQQQQPQQYVPtP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      69.75|      22|      80|     202|     234|       6
---------------------------------------------------------------------------
  172-  193 (39.71/22.27)	Y.SDDHESSNPLDDL..HEEMLQED
  210-  234 (30.05/14.70)	YeSPSRQDSAFLRNLilYNSQLQNF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.33|      19|      22|     499|     517|       7
---------------------------------------------------------------------------
  499-  517 (30.82/22.10)	EPKKATFS...TTSSATTTTTT
  520-  541 (25.51/17.04)	KPVKVVVSsstTVAPPSVTVKT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.85|      13|      24|     268|     283|       8
---------------------------------------------------------------------------
  268-  280 (23.99/16.62)	PLADARSGYGSFG
  286-  298 (24.87/ 8.29)	PGDAAPGAYVPSG
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP08009 with Med15 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ETRMQLGTPKADDGSAHQEPKSSKIYDALK
2) GGARGRQLPPLDASNEEDFEEYDDTEPDYEYDSPLA
3) QRQLQQQQQQLQAQQQLQKEQKQQQLLRTLSSDYQPTYEADNWQKDSPSYNAYDYDADEYDDSWSHWDRKRNVEPKKATFSTTSSATTTTTTTKKPVKVVVSSSTTVAPPSVTVKTGNGQKEVVLPRPTNP
4) YAHGPSYSYSDDHESSNPLDDLHEEMLQEDERERARDYYPVGQEQW
5) YPGDAAPGAYVPSGASSSSGRMNALSKLNSFRNSMAQNQIDEDDEEVQELKSLIHQQKSSQRLPPMLMDKMAPFVLKQQQQPQQYVPTPAASQKPQPQQQQQQVHQRQSKQQLPQLQPHQQAQQLQREQQLLLQQQQQQQ
570
235
426
164
285
599
270
556
209
424










Molecular Recognition Features






MoRF SequenceStartStop




1) KSYYYMP
2) PTPYYYAH
3) QLPPQYFPFAPY
123
159
92
129
166
103