Description | Mediator of RNA polymerase II transcription subunit 1 |
Sequence | MSSSGTAAAVVGGVSGTLPALLMANGGSGGGAGGKGLGKSDIKPPGSIGGPGGGPGTGGGTTGKVLLGGDKHETWQMELLMERLRTKAKSAQYKSFPEMSKSVRMSLLEKRYALDAVEKSNLQKTLDSMQYCIKVTTRQGLVERLDCLTRQLGLKLSEDTSGLFISSDMFYLEIILDPAGGTVQDVKVHHECKMKQQSCSELVACLQRGDFADFTTQLEGLASIYQLNAEKKIKVNAFVALQALETDLHTLYTLSAAHYPDVQSQLAKAPLGLVQKRRGGHPMRLTYFVAPYELLDLGARTLNALSAERIAAERIGCSVAVVLEAASANKLQIQPLVVVSGGGAAAQPVYTPIEKHNSTSLPASFVLRLSKPMPINGAMMRAIRGIVGGAVEQAGGDGGAGSSSTGLPGSLLALIAHHASGGSVKDLAKGLLVSLPDQYHCYHLTDNPALRGVMVSSIPFTEPQHVPKILTYLRQQVVFNQLLASCIRTNVPPAAATATASTGALGSTGRPSALQQLLDGGAAHHEPGLGGLLVFEVSALSCQYITVSLMHPYEESLATVEFDLANIANIAVRIYCGEGQATDQHTLDRISGVLQRCMSIPVTLRALMKHWEEEHEQKFKPSVLGSAVPSTNGGGPGGGGGGTGPDGTGSGTGGAGSSEDTPMNGFNLSSLAGGGSAAAAPSSGDGGAGTPGSNATGTNSTTNGMNGGGGGVDTSGLDFCDMLTDRNGGREPPEPLAGGVAKKRRMEDFCKSPKSDSNLSAGGGGGVGEGVEMAGTATSTTTTTRDGLVVTVGRSEQQRTQQPPVGAPEEDTDGRVTTPAPAGGGVVDGKGSSLGGTTNTSATTTITTTTTTSNATASAALKTDAILLHLPDADLVKPVQSSSSSSLSSLSSSSSVAAASLGFTGAVVASGEPPERAPSAGTLLLESLEFSPTPTDRPSVKRRRSSSSSSSSSSSSSSSSSSSSSSSGASDAELEQAVEPVDLVEAEMSSFFAETACTPPVKVPSSGKPLQKVLSPGIEKPAGLEIIPLTTTSATTTATVSPNMLAGGFPAATVTITPLAGPQGTTNTSTPSPASTSASAPKKSSSSSSSTGSGHRKDATDRASSGKSEKKKKRKLDDGGGSGHLAMGPPNKLPFKSGESSPHRSGIGSSSSSSTSGSGSRSSPKHSSPVHHSSPKHAGTAGALGFHSPKHGSPSVSPKHPMHAGGGSSTGGGKPSMSALKSAAASGNSPSSKPSDPSGVGSGGSGGGSSGTNTSATGSSSKERDKDRSEKKALQFPGNSTTNSGGTSSSNTSNANSGSRSKASGLKLKQLDLAPGSSMTISMTGDSGSSSPIVAPMIDLTGSSGPAQQGSLPGTGMTTTASSMLQALQAAKNRKAPSSAGGGGGGGTVGGGGGLGGSLSAVIDKLKSAQSVDDDGGAVLVLPEMTITQQTTSSNALGVNIGSFGSLGGGTLKDTSKTSSGGLLASTGGSGGGTLANCVSSAAGIGAASTQPSSMTSAPSLTAALTSGKASEYMVKPSSDGIKLTIQNKKGSNKSSSSSGGGSSNKSGGSNKSGLKSGVSSGPASSKQQQQQQQQQQNHTTSFSGAFPSSTKSPHYSSSSSKAPFQKSNSFGSLSGTGSGGLKASKVSSPKSASNPASSSSSSSSSSSYSSSSSKSSKSSKSSSASSLAGAMLAGAVAGAGAGSGSALVNPISIMKMLGYPTGSMGNMEGFAKSLDTKFQIPKLSARSNSGGGSGGSGSAGASGAGDPGDGGSSNKSAQKDATVRKQKPNTSSSPAAQVSAGAGGPAPLRQFTTASSPSGDASARLLSDLLGAAAAKSASKGPGGGGIASVDGAGGSAALHPLLPNIVQKMFGSDGTLQSKSNSSDGSMFPSAGRASPGMLSGGGGGGGSSSRDGFRSGSAPGTPTATGSMVLPPFPSPISGSASNDADAGALMRPPSRPSSTISNHSHSSQDGTGNSTDTTTTNTPPGVNSMAAAAAAAAAASMMLMNAMSGAGAQSSATGGTIPLDGSSSTSTTQQLMMAALAAKSGGGGVLPSTASNLLNNHHLHHHASNLLGNLPSPASVSVHIVKSPAPSPLPFASPHSNASSGHGGAGAGGGSGGGGGVPGLDDDLMDEALIGIGSK |
Length | 2123 |
Position | Middle |
Organism | Anopheles dirus |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Culicoidea> Culicidae> Anophelinae> Anopheles. |
Aromaticity | 0.03 |
Grand average of hydropathy | -0.291 |
Instability index | 53.01 |
Isoelectric point | 9.21 |
Molecular weight | 208858.85 |
Publications |
Annotated function |
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP08004 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 5| 1999.26| 483| 491| 998| 1488| 1 --------------------------------------------------------------------------- 341- 641 (270.76/45.34) ...................................................................................................................................GGGAAAQPVYTPIEKHNSTSLPASFVLRLSKPMPIN.GAMMRAIRGIVG...GAVEQAGGDGGAG..SSSTG...LPGSLLALIAHHASGGSVKDLAKGLLVsLPDQYHCYHLTDNPALrGVMVSSipftepqhvpkiltylrqqvvFNQL...............................LASCIR......................................................................................................................................................................................................TNVP.P...........AAATAT.....A................STGALGSTGRPSAL.............QQLL..DGGAAHH.EPGLGGLLVFEvSALSCqyitvslmhPYEEslatvefdlanianiavriycGEGQATDQHTldriSGVLQRC.....MSIPVTlRALMKHWEEEHEQKFKPSVLGSavPSTNGGGPGGGGG 649- 899 (266.13/44.07) GSGTGGAGSSedtpMNGFNlSSLAGGGS....AAAAPSSGDG.GAGTPG.SNATGT.NSTTNGMNGGGGGVDTS...GLDFCDMLTDRNGG...REPPEPLAGGVAK....KRRMEDFckSPKSDSNLSAGGGGGVGEG.V.EM...AGTATSTTTTTRDGLVVTVGRSE........QQRtqQPPVGAPEEDTDGRVTTPAP...AGG...GVVDGKGSSL.....GGTTNT.SATTTITTTTTTSNA......TA.....................SAALKTDaillHLPDA......DLVKPVQSSSSSSLSS.LSSSSSV..AAA........................................................................................................................................................................................................................................................................................................................................................................................................... 998- 1206 (233.54/42.02) .........................................................................................................................................................................................................................................................................................................................................slgftgavvasgepperapsagtllleslefsptptdrpsvkrrrsssssssssssssssssssssssgasdaeleqavepvdlveaemssffaetacTPPVKV...PS......SGKPLQKVLSPGIEkpaGleiIPLT.......TTSATTTATVSPNMLAGGFPAATVTITPLAGPQGTTN....TSTPSP...........ASTSAS.....APKK..........SSSSSSSTGSGHRKDATDRASSGKSEKKKKRKLD..DGGGSGHLAMGPPNKLPFK.SGESS.........PHRS.....................GIGSSSSSST....SGSGSRS..SPKHSSPVH.HSSPKHAGTAGALGFHSPKHGS..PSVSPKHPMHAGG 1207- 1699 (714.06/137.26) GSSTGGGKPS....MSALK.SAAASGNS....PSSKPSDPSGVGSGGSG.GGSSGT.NTSATGSSSKERDKDRSEKKALQFPGNSTTNSGGTSSSNTSNANSGSRSKASglKLKQLDL..APGSSMTISMTGDSGSSSPIVAPMIDLTGSSGPAQQGSLPGTGMTTTASSMLQALQAAKNR..KAPSSAGGGGGGGTVGGGGG...LGGSLSAVIDKLKSAQSVDDDGGAVLV.LPEMTITQQTTSSNAL.GVNIGS.....................FGSLGGG....TLKDTSKTSSGGLLASTGGSGGGTLANCVSSAAGI..GAA.................................................................................................sTQPSSMtsaPSltaaltSGKASEYMVKPSSD...G...IKLTiqnkkgsNKSSSSSGGGSSNK.SGG......S.....NKSGLKS....GVSSGP...........ASSKQQ.....QQQQqqqqnhttsfSGAFPSSTKSPHYS.....SSSSKAPFQKSNSFGslSGTGSGGL..KASKVSSPK.SA.SN.........PASS.....................SSSSSSSSSY....SSSSSKSskSSKSSSA....SSLAGAMLAGAVAGAGAGSGS..ALVNPISIMKMLG 1700- 2097 (514.77/95.05) .YPTG....S....MGNME.GFAKSLDTkfqiPKLSARSNSGGGSGGSGsAGASGAgDPGDGGSSNKSAQKDATVRK..QKP........NTSSSPAAQVSAGAGGPAP...LRQFTT..AS......SPSGDA.................................SARLLSDLLGAAAA..KSASKGPGGGGIASVDGAGGsaaLHPLLPNIVQKM.....FGSDG..........TLQSKSNSSD....................................G....SMFPSAGRASPGML.SGGGGGGGS.....SSRDGFrsGSA.......................................................................................pgtptatgsmvLPPFPS...PI......SG................................SASNDADAGALMRPPSRPSSTISNHSHSSQDGTGNstdtTTTNTPpgvnsmaaaaaAAAAASmmlmnAMSG..........AGAQSSATGGTIPLDGSSSTSTTQQLMMAALAAK..SGGG.GVLPSTASNLL..N.NHHLH.........HHAS.....................NLL..............GNLP..SPA.SVSVHiVKSP....APSPLPFASP.HSN..AS.SGHGGAGAGG --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 65.48| 17| 19| 22| 38| 2 --------------------------------------------------------------------------- 22- 38 (32.24/ 9.50) LMANGGSGGGAGGKGLG 42- 58 (33.24/10.10) IKPPGSIGGPGGGPGTG --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 49.64| 16| 18| 119| 134| 3 --------------------------------------------------------------------------- 119- 134 (27.82/21.89) KSNLQKTLDSM..QYCIK 138- 155 (21.81/15.35) RQGLVERLDCLtrQLGLK --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) AKKRRMEDF 2) EKKKKRKLD 3) KHAGTAGALGF 4) LKLKQLD 5) LSDLLGAAA 6) SALKSA 7) SMLQALQAAKNR | 741 1109 1176 1306 1807 1218 1363 | 749 1117 1186 1312 1815 1223 1374 |
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