<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07900

Description Uncharacterized protein
SequenceMATPGPGGLVGLLPMLKQEPSMTVPQPLSTPNSLLGGMNNLNGLSAGHPYSNPPSQGAQSQPHSRPPSVNSLPGGIMGGGAGMLSPSPIGASSGGLFHPGIGGIPVPLRQGMSPISPATPGGGGSMRVPTPQGSCPLPYPSPLGGAGSPNPMGSLGFRRGTPLLPPPPYDVAIASPANSVATPSSYHSKQFPLDGVDGAGGPGSNRGPMTPSSSTLGPSSVHPPLGSASGVGAANGGMHGTNGVAVTATGCRPPTVASIETNALLVNVLLYDTALNIFRDHNFNSCTLCVCNAGAKCVGNIRGADSGLYIALPGTNWMESVTASEPADTGSNQLPGGAAVRNKSGLLAHLGLGSGGSNSNSSSSNSSAFGVGSPAIGHDQRPVTINTDSLQNGYLDEDPIDCQCGFSAVVNRRMSHRAGLFYEDEMEITGMAEDPAVHKKSALFEFLNG
Length449
PositionMiddle
OrganismAnopheles atroparvus
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Culicoidea> Culicidae> Anophelinae> Anopheles.
Aromaticity0.04
Grand average of hydropathy-0.168
Instability index55.27
Isoelectric point6.24
Molecular weight44905.87
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07900
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     177.11|      32|      33|     176|     207|       2
---------------------------------------------------------------------------
   27-   51 (35.48/ 9.35)	P...LSTPNSLLGG.....MNNLN...GL.SA.GH.P........YS...
   53-   94 (37.38/10.24)	PP.SQGAQSQPHSRppsvnSLP.G...GIMG..GG.AgmlspspiGASSG
  176-  207 (65.39/23.43)	PANSVATPSSYHSK.....QFPLD...GVDGA.GG.P........GSNRG
  211-  243 (38.85/10.94)	PSSSTLGPSSVHP........PLGsasGVGAAnGGmH........GTN.G
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.96|      14|      20|     120|     137|       3
---------------------------------------------------------------------------
  129-  147 (21.62/ 6.41)	PTPQGSCPLpypsPlGGAG
  326-  339 (26.34/ 8.42)	PADTGSNQL....P.GGAA
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07900 with Med13 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) PGGLVGLLPMLKQEPSMTVPQPLSTPNSLLGGMNNLNGLSAGHPYSNPPSQGAQSQPHSRPPSVNSLPGGIMGGGAGMLS
2) PSSYHSKQFPLDGVDGAGGPGSNRGPMTPSSSTLGPSSVHPPLGSASGVGAA
3) SPIGASSGGLFHPGIGGIPVPLRQGMSPISPATPGGGGSMRVPTPQGSCPLPYPSPLGGAGSPNPMGSLGFRRGTPLLPPPPYDVAIASPA
6
183
87
85
234
177










Molecular Recognition Features






MoRF SequenceStartStop




NANANA