<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07897

Description Uncharacterized protein
SequenceMDINPFGNNNTSGGGGSSSSGGQHGPSGPQLVEKELTVGKTMQLQNVCGMNNNIGVGSNNNHYGSGGIGLLKDKYGGGGGGGSSTVKLSSNQSASKSTPSSDGYSFYYNNQPPSLTCSPTENQSMAATLGSSNGGNGGGSSSGGRGGLLLSDDEDISERSKKDPTGPSRWMDRNYCHLSVSHYPSGPKSKGGGVPAGQQQQQQQQQQQPKRGGSTSVYKPVNCYNMVLQSPLEDESDMEDKLKYFNYQHEMQTYNSTRKDKHGFSSSSGGDMHYAHKGIGGSEGEDILVLGSMAASEHEKALLGGKQQQKDGDSDEALPKMNLLHLSQKLELVPHVGLSVASPSTENELMLNAEFSDKQMTQFGEPDLRDNKSSPGSNIMQYDGSPRRFGLNLCDESDCYLASSVKINLTSPSLLTLPRPGFPQRVVPAATSASTTSAVAGPNKASMTPSANLSCSPSLLDQVNSSLNKTMLFEASKNGRASDGEGNLFAGGDVSKANSARKEQEQHGYDSLQSCDQGKPSPSETGMMSHADKVQLNAQAAAAAAAAAADDELTMHGGTSSFPPITNSSTFDYLYEFSETRKVLEEFFKCPSTEDVEKFSDYNDSGDEDDAESLDVQYDYPVELERSKAIETTYIGNMNGAGKRDRARSPKSPSMLTGDGLALEQQQEQEEEEDDDDEDDHTADVEDEEEDDGKGNGLTKYNFKLKAGKTRPIAEIGAGGMLRKKKSTDLHLLKGHSNVGKNFNYSPDTTDYDSNCGDYDSEISPQYGSDFGLITGSGATMCEDLNNGVISAASGAGPAPGESLNCLFTSSAGNYSRYYAAMPVLEDGLSSGHVSDSDTNNQHNANGTVTVLPPDLVTGSIKQLVSGGTGGTGSAYDTIQSTPPPPAPAPHRKSSIDCDNIPGLQQQQQQQQQQQQQQQQQQLNHLQQLQQPSHQQQQQQQQQQQTQQQQQPQQSQLHPQQFNHLQTSSADVQSTLKDIRICLQKTKSINLVAGGAQTRKAFDKNSLCSGEFSTDPLGGGAGGTGVASASGAGGGVGMPGGPSLSPIWIPRTRVAADVQDYAGKQVTPGGAGTGSSTLGNGLPPLPGPAKLSSSPSSLLSSALPVAGGGKPGGSGSAYPEESEALIGGHGHGQPAKSPGVPLADEDEDPDTDLETDRLLGHQRLDDQGFYDESSGGKQWSSERKTGPRLLLGKLSPKQAQGMASTAVALQNGGKPANQQQAAGQGPSERTLGVGGGRGSAAPNSSVSSFLQAAASGGTASGGSAQGPVGSSAGVGVGASSVTLPELSGSTSATGTPIAPSSAAGGGAGSGGATVGHKAAKASAAGNLINFNGPNDPQTQLTSPNPSPQHSLGEGNLLDKSNDSGSPGGSTKSKSLHNNETKRKSKNKEVLIEGVLFRARYLGSTQLVCEGQPTKSTRMLQAEEAVSRIKSPDGEVQPSTEVDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGDLVVLMARRRFVPQDVDSTDSSGGGGGGAGGGGNGTTTHSGSHAGGGSTPSQKLAGGGGAGSGGAGPKGNRTPKMICHVFESEEAQFIAQSIGQAFQVAYMEFLKANGIEDHSFMKEMDYQEVLNSQEIFGDELEIFAKKELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLASSGAAARCGQLNIGDQIIAINGLSLVGLPLSTCQGYIKNTKNQTVVKFTVVPCAPVVEVKIKRPNTKYQLGFSVQNGVICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATSVGEILMKTMPTSMFRLLTGQENPIYI
Length1802
PositionTail
OrganismAnopheles atroparvus
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Culicoidea> Culicidae> Anophelinae> Anopheles.
Aromaticity0.05
Grand average of hydropathy-0.589
Instability index54.25
Isoelectric point5.27
Molecular weight188128.08
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07897
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      92.45|      21|      29|     902|     930|       1
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  902-  922 (46.00/22.23)	PGLQQQQQQQQQQQQQQQQQQ
  932-  952 (46.45/19.38)	PSHQQQQQQQQQQQTQQQQQP
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     314.22|      55|      56|    1018|    1072|       2
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 1018- 1050 (51.90/14.92)	......................GG.GAGGTG......VASAS.GA..............GGGV.GM..PG......GPS...LSPIWIP
 1051- 1104 (55.03/16.32)	RTRVAADVQDYAGKQVTPGGA.......GTG........S.S.TL..............GNGLpPL..PGpaklssSPS.slLSS.ALP
 1204- 1242 (45.91/12.25)	STAVALQNGGKPANQ........Q.QAAGQG......PSERTlGV..............GGGR.GS..AA..................P
 1243- 1288 (60.20/18.63)	NSSVSSFLQAAASGGTASG....G.SAQG.P......VGSSA.GV..............GVGA.SS..VT......LPE...LS....G
 1289- 1347 (54.04/15.88)	ST..SAT.....GTPIAPSSAAGG.GAGSGGatvghkAAKAS.AA..............GNLI.NFngPN......DPQtqlTSPNPSP
 1485- 1543 (47.13/12.79)	RRFVPQDVDSTDS....SGGGGGGaGGGGNG......TTTHS.GShagggstpsqklagGGGA.GS..GG.....aGP...........
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      99.31|      33|      64|     589|     625|       4
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  589-  625 (50.45/32.06)	KCPS..TED...VEKFSDYNDSGDEDDAEslDVQYDypVELE
  651-  688 (48.86/21.14)	KSPSmlTGDglaLEQQQEQEEEEDDDDED..DHTAD..VEDE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     135.84|      30|      46|     138|     168|       5
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  138-  167 (53.91/20.15)	GGSSSGGRGGLLLSDDEDISERSKKDPTGP
  186-  213 (46.13/13.15)	GPKSKG..GGVPAGQQQQQQQQQQQPKRGG
  866-  888 (35.79/12.09)	....SGGTGG.TGSAYDTI.Q.STPPPPAP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     171.07|      55|     241|     214|     271|       6
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  214-  271 (90.33/69.56)	STSVYKPVNC...YNMVLQSPLEDE.SDMEDKLkyFNyQHEMQTYNSTRK..DKHGFSSSSGGD
  456-  516 (80.74/50.69)	SPSLLDQVNSslnKTMLFEASKNGRaSDGEGNL..FA.GGDVSKANSARKeqEQHGYDSLQSCD
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.19|      12|      15|     737|     748|       7
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  737-  748 (23.19/14.95)	SNVGK.NFNYSPD
  754-  766 (19.00/10.62)	SNCGDyDSEISPQ
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      76.87|      16|      56|     772|     787|       8
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  772-  787 (30.41/14.91)	GLI...TGSGATMCEDLNN
  788-  806 (22.43/ 8.79)	GVIsaaSGAGPAPGESLNC
  828-  841 (24.03/10.02)	GL.....SSGHVSDSDTNN
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---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     114.49|      29|      29|    1133|    1161|       9
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 1110- 1139 (35.67/18.86)	KPGGSGSAYPE...ESEA......LIGghgHgQPAKSPG
 1140- 1168 (49.53/29.74)	VPLADEDEDPDTDLETDR......LLG...H.QRLDDQG
 1169- 1201 (29.28/13.84)	..FYDE.SSGGKQWSSERktgprlLLG...KlSPKQAQG
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.87|      15|     703|      98|     112|      11
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   98-  112 (31.44/19.06)	TPSSDGYSFYYNNQP
  809-  823 (29.43/17.32)	TSSAGNYSRYYAAMP
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07897 with Med15 domain of Kingdom Metazoa
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