<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07893

Description Uncharacterized protein
SequenceMMMMVTTTAEDDGCGPSSNGRETAIASNYCDNLSAADEADGEEEEEEDEENEEHNEAGQQQHHLHHEHLLMNANSIGHLECTEENEEEVGEPLEEDQYGQHDHLDHERQQEQHQQQLQIGGRSEEDDEDGPPGSFVLDHQQMQQLQQQFQLTGTQGVHQHQQLQQQDGMIHGHPQGITTGTHHLLLAGADVGMTFDEGCTSELIADGVDCVLQGECEEEEPEEQLDGEEVYPGPAGDSMDSEPDGQMHQSLHQHAGMVHHQQQQQHYQNHHHQLVEKYIEEVDGSGGGSVGATGAGSGGAGYVLETTGGEMISTEIVEHNHHDHGTVMVEEQDTQEQQQQRRRRSMVVEEEPVESRQEEPVNGGEILSEADDGATGAGEGALLENNRLLDVNDDGLLHEVGTIVEVQHEEEHHHQEEELGQQQEPNQKEQQRQPRDGRDVPNMIIDGGMGVAMVHPVAQRSLPEVLVTRQQQQQHQQQLPPASVSKSSVPTEHFLPTSTNTTNNVPAASAARRTTTILVVEDCIATNGVDHHQHNLPPFQHQPVRYGRRPSIDAEGNGRMTRNLLPLKFVPECGAGGGGATLVKKSFPEPLDLYLVESGSVESVAGRAAVMGGVRCGGSVVRPGGEEALAPCGDWPQFKMKMMDTSKMLVVDHHQLVDGSNSIILSPIGTAGTPTMASSPGATSLQASNLLAGQQPQLQTLHQHMVSTSQQQQQQQQQHHTIQQQSPTTIPMTAATLVQQIAAQNHHQQQQLHPNAAATTAGISFLAHHHHPQQPGAATVINPQQQQQPTQQQQQGMSIFQLQASVQQQQQQPHGNGQTALGGVATTVTSHPVTVGGSSAIQLTSEASAVIKPFFTLPTCVRVHGICFGKLAILRLI
Length877
PositionTail
OrganismAnopheles atroparvus
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Culicoidea> Culicidae> Anophelinae> Anopheles.
Aromaticity0.03
Grand average of hydropathy-0.739
Instability index62.05
Isoelectric point4.81
Molecular weight95410.25
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07893
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             8|     663.52|      91|      91|     254|     344|       1
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   17-   94 (83.66/21.68)	SSNGRETA....IAS..NYCDN......LSA.ADEADGEEEEE.EDEEN..............eeHneAG.......................QQQHHL..............H....HEHLL........MNAN.................SI......GH..........L.....EC.T...EENE....EEVG............EPLE
   95-  213 (70.25/17.15)	EDQYG........QH..DHLDH...........ERQQEQHQQQlQIGGRseeddedgppgsfvldH..QQM....................QQLQQQFQltgtqgV.......H....QHQQLQQQ......DGMihghpqgittgthhlllAG......AD..........V.....GM.TfdeGCTSeliaDGVD............CVLQ
  214-  305 (124.81/35.55)	...GECEE.EEPEEQ..LDGEEvypgpaGDSMDSEPDGQMHQS.....L..............hqH..AGM....VH.............HQQQQQHYQ......N.......H....HHQLVEKYIEE..VDGS.................GG......GS..........V.....GA.T...GAGS....GGAG............YVLE
  306-  384 (93.70/25.06)	TTGGEMIS.TEIVEH..NHHDH......GTVMVEEQDTQEQQQ.QRRRR.................................................................smvvEEEPVESRQEE.pVNG...................G......EI..........LseaddGA.T...GAGE....GA...............LLE
  398-  496 (72.58/17.94)	HEVGTIVE....VQHeeEHHHQ......EEELGQQQEPNQKEQ.QRQPR......dgrdvpnmiiD..GGMgvamVHpvaqrslpevlvtRQQQQQHQQ......Q.......L....PPASVSK..............................................................SS....VPTE............HFLP
  497-  597 (70.77/17.33)	TSTNTTNN.VPAASA..ARRTT......TILVVED...........................ciaT..NGV....DH.............HQHNLPPFQ....................HQPV.RYGRRpsIDAE.................GN......GRmtrnllplkfV.....PE.C...GAGG....GGATlvkksfpepldlYLVE
  598-  686 (63.53/14.89)	SGSVESVAgRAAVMG..GVRCG......GSVV...............RP...........ggeeaL..APC....GD.............WPQFKMKMM......DtskmlvvD....HHQLV.........DGS.................NSiilspiGT..........A.....GTpT...MASS....PGAT............S.LQ
  759-  833 (84.21/21.86)	TTAG..IS...FLAH..HHHPQ..qpgaATVINPQQQQQPTQQ.QQQGM............sifqL..QAS....VQ.............QQQQQPH....................................GN.................GQ......TA..........L.....G......GVAT....TVTS............HPV.
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      71.63|      22|      24|     697|     720|       2
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  705-  731 (33.01/13.23)	MVSTSQQQQQQQQQHHtiqqqSPTTIP
  732-  753 (38.62/11.35)	MTAATLVQQIAAQNHH.....QQQQLH
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07893 with Med15 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) CVLQGECEEEEPEEQLDGEEVYPGPAGDSMDSEPDGQMHQSLHQHAGMVHHQQQQQHYQNHHHQLVEKYIEEVDGSGGGSVGATGAGSGGAGYVLETTGGEMISTEIVEHNHHDHGTVMVEEQDTQEQQQQRRRRSMVVEEEPVESRQEEPVNGGEILSEADDGATGAGEGALLENNRLLDVNDDGLLHEVGTIVEVQHEEEHHHQEEELGQQQEPNQKEQQRQPRDGRDVPNMIIDGGMGVAMVHPVAQRSLPEVLVTRQQQQQHQQQLPPASVSKSSVPTEHFLPTSTNTTNNVPAASAAR
2) MMMMVTTTAEDDGCGPSSNGRETAIASNYCDNLSAADEADGEEEEEEDEENEEHNEAGQQQHHLHHEHLLMNANSIGHLECTEENEEEVGEPLEEDQYGQHDHLDHERQQEQHQQQLQIGGRSEEDDEDGPPGSFVLDHQQMQQLQQQFQLTGTQGVHQHQQLQQQDGMIHGHPQGITTGTHHLLLAGADVG
3) PIGTAGTPTMASSPGATSLQASNLLAGQQPQLQTLHQHMVSTSQQQQQQQQQHHTIQQQSPTTIPMTAATLVQQIAAQNHHQQQQLHPNAAATTAGISFLAHHHHPQQPGAATVINPQQQQQPTQQQQQGMSI
4) VDHHQHNLPPFQHQPVRYGRRPSIDAEGNG
210
1
667
529
512
192
799
558










Molecular Recognition Features






MoRF SequenceStartStop




1) YGQHDHLDH
98
106