<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07889
Description |
Mediator of RNA polymerase II transcription subunit 15 |
Sequence | MAEDNSWKTSNFRQSVVNKINEAIQQTGMTSSKNGIEMENHVFHKARNKDEYLGFVARLILHVREMNNKHKNQQNAAAAAQQQAQQEAGGNANQQGVGMPDPINALQNLASQGTRPQMMGQMGPGGPMGGQMVPGNASNLLHSLRPQMQMGGMGGGAGMQGNRVGMGPGPGGQMGGMMGPNQMQGPGPGAGMTMSNAVGGPNQMNPTVAMGGGVGAGGGGGAGSGVMGPVPGQMGMAGGVGGGAGPQGNFVGMAGNQMVRKPPDMMPGGTVFPGGGGAVRSVTPNNFLRQSPSPSVPSPVGPGAHGPPSHPGQMIPSPALIPSPNPLMGSVPQRSTIGQSPGASLNTPGQPGGAVPSPLNPQEEQLYREKYRSLTKYIEPLKRMIAKMENDDIDKIAKMKRLLEILSNPSVRIPLETLHKCEAALTSQLGSIRETPTNNPLVEAISSTLQSANGNLTLQRTFRSCLEALYGPDIKNLPPPTKQLRLEEPSQGVGVGATGAGTTVGASGVGGATTAGGVSGSSSSTAQEIPHILQVEIARLDQKFKVSLDQCAISGTKTIKLMIKLDDTNLPCVPPVAVTIPEDYPYTAPSCSLIEQDYNGTPFLILVQKSFMARICKLPGFFTLSHLLDTWEMSVRQACSPNPTIVTPTATSVLLGM |
Length | 657 |
Position | Tail |
Organism | Anopheles atroparvus |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota>
Neoptera> Endopterygota> Diptera> Nematocera> Culicoidea> Culicidae>
Anophelinae> Anopheles.
|
Aromaticity | 0.03 |
Grand average of hydropathy | -0.312 |
Instability index | 50.55 |
Isoelectric point | 9.05 |
Molecular weight | 68101.12 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364148
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP07889
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
6| 399.76| 58| 58| 118| 175| 1
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72- 107 (43.64/ 8.44) ...........................NQQNAAAAAQQQA....QQ.EA.G...GNANQQG..VGM.PD.PI..NAL...Q
118- 175 (126.53/36.88) MM..G..QM.GPG..GP..MGGQMVPGNASNLLHSLRPQM....QM.GGMG...GGAGMQGNRVGMGPG.PG..GQM...G
177- 235 (91.89/25.00) MM..GpnQMqGP...GP...GAGMTMSNAVGGPNQMNPTV....AM.GG.GvgaGGGGGAGSGV.MGPV.P...GQM...G
236- 262 (40.67/ 7.42) M.............................................aGGVG...GGAGPQGNFVGMA....G..NQMvrkP
265- 301 (48.06/ 9.96) MMpgG..TV.FPG..G....GGAV.........RSVTPN......................NFLRQSPS.PSvpSPV...G
302- 353 (48.96/10.27) ...........PGahGPpsHPGQMIPSPA..LIPSPNPLMgsvpQR.STIG...QSPGASLNT....PGqPG..G......
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 42.47| 13| 15| 378| 390| 2
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378- 390 (22.21/17.29) IEPLKRMIAKMEN
396- 408 (20.27/15.11) IAKMKRLLEILSN
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