<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07886

Description Uncharacterized protein
SequenceMSLPINSLYSLTWGDYGTSLVSAVQLLRCHGDLVDVTLAAGGRSFPAHKIVLCAASPFLLDLLKNTPCKHPVVMLAGVNASDLEALLEFVYRGEVSVDHSQLPSLLQAAHCLNIQGLAPQTVSHKDDNTTYTTSIQLHPTLVPQNHVKAVIDVGNNVCTEDLITTLTPTQTVQAQVIETITPDQITEEVTNVKDVISQFLPTRKRKQRTKKSATPGQPGASANSAGGAQVAKVMKTDDEGTIQAIIVASAEEGAAVAKDIKKESNADGTSIDTKEGIIKIKSKSQSEQPATCPICQAVIRQSRNLRRHLELRHFKKPGVKKERVRKSKKGQAGNSTQANGSNGTNAGTVMSNEQVAQQQQQQQQQQQQQQQQAQQQAQQQAQQQQQQAQHQQTTIDTTGTISVTVSQAQAQQIEAAAANGQQHVVTQHENADGTTSLSIAQVQTLDGHQLAIGNLNQATLIRTGESIETGIIATHEPTLRPHTELFRVGNTVYTIEERRTDAPNRLT
Length507
PositionKinase
OrganismAnopheles atroparvus
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Culicoidea> Culicidae> Anophelinae> Anopheles.
Aromaticity0.02
Grand average of hydropathy-0.490
Instability index39.36
Isoelectric point7.27
Molecular weight54797.74
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07886
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      71.59|      20|      22|     353|     372|       1
---------------------------------------------------------------------------
  352-  371 (38.10/13.76)	N.EQVAQQQQQQQQQQQQQQQ
  372-  392 (33.49/11.34)	QaQQQAQQQAQQQQQQAQHQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      83.06|      21|      22|     159|     179|       2
---------------------------------------------------------------------------
  136-  156 (19.42/ 9.32)	..QLHP.TLVPQNHVKA.VIDvgnN
  159-  179 (35.35/23.43)	TEDLIT.TLTPTQTVQAQVIE...T
  181-  202 (28.28/17.17)	TPDQITeEVTNVKDVISQFLP...T
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.50|      22|      24|     222|     245|       3
---------------------------------------------------------------------------
  222-  243 (37.00/23.99)	ANSAGGAQVAKVMKTD..........DEGTIQ
  248-  279 (26.51/10.02)	ASAEEGAAVAKDIKKEsnadgtsidtKEGIIK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      34.59|      10|      24|     460|     469|       4
---------------------------------------------------------------------------
  460-  469 (16.66/11.15)	LIRTGESIET
  485-  494 (17.93/12.53)	LFRVGNTVYT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      36.98|      11|      33|     399|     409|       6
---------------------------------------------------------------------------
  399-  409 (18.51/10.18)	GTISVTVSQAQ
  433-  443 (18.46/10.13)	GTTSLSIAQVQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      36.96|      11|      22|      78|      88|       7
---------------------------------------------------------------------------
   78-   88 (17.35/10.94)	VNASDLEALLE
   97-  107 (19.61/13.30)	VDHSQLPSLLQ
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07886 with Med12 domain of Kingdom Metazoa
Unable to open file!