<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07844

Description Uncharacterized protein
SequenceMALTTDDDDDRMPAAVWLLRTFIHHQPVKQQHRPDVYSRGMSFAWAGGSSNRAPTASEYSAKVKPRSVILAPFGLAATLTGQSYKASDPQTQKVLDDWSAFYPISNKNMHLSESADTVPPIVEIMTGGVKMRYPSKYVLVTDIDDWSPPSSNGSQTTVAKSSSPQSAASLTAAVSNALGAPSGEFTPNNSKQQPLPELANSKPAMNPPLTVPESPLNDLGNQNSMSSALINNSPAVLLPERVWQDCIMHATPTIPPPQQSPLDEGVGGGGATIKTEPSSNASSTPTSSSSSGSSSGSSSNNENNSSMVTAAALVDANANSVWEITDPTVKVPCSCIK
Length337
PositionMiddle
OrganismAedes albopictus (Asian tiger mosquito) (Stegomyia albopicta)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Culicoidea> Culicidae> Culicinae> Aedini> Aedes> Stegomyia.
Aromaticity0.05
Grand average of hydropathy-0.409
Instability index64.79
Isoelectric point5.22
Molecular weight35426.96
Publications
PubMed=26483478

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07844
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     167.61|      39|      45|     188|     230|       1
---------------------------------------------------------------------------
  162-  185 (25.70/ 7.29)	.......................S.SPQSAASLTAAVS..NA.LGA....PSGEF
  188-  230 (64.85/34.82)	NNSKQQPLPE......L....ANS.KPAMNPPLTVPESPLND.LGNqnsmSSALI
  231-  273 (51.54/20.86)	NNSPAVLLPErvwqdcI....MHA.TPTIPPP...QQSPLDEgVGG....GGATI
  303-  334 (25.52/ 6.35)	NNSSMVTAAA......LvdanANSvWEITDPTVKVPCS.................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      32.01|       8|      46|      95|     105|       2
---------------------------------------------------------------------------
   95-  105 (12.88/16.48)	LDDWSafyPIS
  143-  150 (19.13/11.20)	IDDWS...PPS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07844 with Med13 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) PPSSNGSQTTVAKSSSPQSAASLTAAVSNALGAPSGEFTPNNSKQQPLPELANSKPAMNPPLTVPESPLNDLGNQNSMSSALINNSP
2) QDCIMHATPTIPPPQQSPLDEGVGGGGATIKTEPSSNASSTPTSSSSSGSSSGSSSNNENNSSMVTAAA
148
244
234
312










Molecular Recognition Features






MoRF SequenceStartStop




1) AAVWLLRTFI
14
23