<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07842

Description Uncharacterized protein
SequenceMVMFEEVLTRGVSGDVYSLADCILQQAVVGSGANTLFLSYLKHSLCAHLISHAAVLKRIAKYDHFEMHHCLIALLDFLESIIAGVTCRGKQEEGLLTKAMLSLVYWLMQIYKHAIETFGENRSLSADQQEVVEKTANVLEKIVQSQFLLGVVYVGKLADPELFGLVAKKCIDIESVTAKTGFVPPVVSQKNVTVNDYIRKVATIETGTLEMKDFDGKGVEPITFCMQPLIAIDILLNPNCDTQMYVLEFLSIRSLKNYPLSRLYCEIIRGCLTCLNNVSGTSRESFICAFTFIKVPQIIRQIHRQSRVLNASDFEDAKPDYSPEVVEAFELLLQDSAILDFMDAKCACNTVEYLLNEMLKHHLINEKQSKMIAAKRDVITSGLQKLDLNTNQHSIVKFVLRAEPPLVGILKTLSSDYNKVQEALLGMLCQVLSGNSFELILSVATVEGKLKTFVAGLIKCNENSKQVPGEMGKPAMTRAALFDVSFLMLVFIVQNYGSEVVPTEGTDSFFEKWVRECMVEKHKSKSPMNMVKLCDQSKVDELIVSLNSPDGLKATSLKWQEICANIPGLLYQVLLAWENDGLSTGEIKKFLDSLKSRFCCFSICATSWLCAYMQIIRQDELLKPMNMVQQFLTNEMNKTMDIVFAIMHLDIERCTTALLSQLIPMMLLNKLQISEIVDPFSRVLAKLCVYCIVATMEAPVPPTKKRSRAAIAAEGDDLDALCSAPKIRKIGSDSCDSTSSDFMLEQVLAARESSTQLKEPLQGCLQALFRTFSQYIVSDELSPKIFFMFQLLSLLVEVGKDRIKPVLKLIPNGLIQNMMKINATDDMTVGFILRLYDLSTASGRQFAMSDLCLFRNIQMRKDSIKL
Length866
PositionTail
OrganismAedes albopictus (Asian tiger mosquito) (Stegomyia albopicta)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Culicoidea> Culicidae> Culicinae> Aedini> Aedes> Stegomyia.
Aromaticity0.07
Grand average of hydropathy0.158
Instability index38.16
Isoelectric point6.10
Molecular weight96966.70
Publications
PubMed=26483478

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07842
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      72.82|      20|      94|     513|     532|       1
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  513-  532 (38.67/23.40)	WVRECM..VEKHKSKSPMNMVK
  608-  629 (34.15/19.90)	WLCAYMqiIRQDELLKPMNMVQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     112.85|      36|     102|     428|     469|       3
---------------------------------------------------------------------------
  428-  469 (49.01/48.35)	LCQvlSGNSFELILSVATVEGkLKtfvAGLIKCNENSKQVPG
  533-  568 (63.84/41.09)	LCD..QSKVDELIVSLNSPDG.LK...ATSLKWQEICANIPG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      75.55|      24|     142|     575|     598|       5
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  575-  598 (43.52/26.30)	LAWENDGL....STGEIKKF....LDSLKSRF
  711-  742 (32.02/17.61)	IAAEGDDLdalcSAPKIRKIgsdsCDSTSSDF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     142.52|      47|     516|     132|     185|       6
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  135-  185 (65.57/55.74)	TANVLEKIVqSQFLLGVVYVGKLADPelFG.LVAKKCIDIeSVTAKTGFVPP
  655-  702 (76.94/42.79)	TTALLSQLI.PMMLLNKLQISEIVDP..FSrVLAKLCVYC.IVATMEAPVPP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      75.15|      23|     430|     379|     401|       7
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  379-  401 (38.61/36.39)	ITSGL..QKLDLNTNQHSIVKFVLR
  810-  834 (36.54/33.93)	IPNGLiqNMMKINATDDMTVGFILR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      78.94|      26|     377|      96|     132|      12
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   96-  132 (33.80/46.53)	LTKAMLSLVYWLMQIYkhAIETFGEnrslsadqqEVV
  476-  501 (45.14/29.54)	MTRAALFDVSFLMLVF..IVQNYGS.........EVV
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07842 with Med24 domain of Kingdom Metazoa
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