<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07839

Description Uncharacterized protein
SequenceMSSEILFVIEGTAINGAYMNDMKSNYIIPTLEYFSQSTVGDDRGGGGTGGDSYGTDKNGNQYGIVVYKTAQSLPGVCCTTFGPYNSAHKVLGALDKLELSGGKSESNANLAEGLATALVCFDDFDELRENGMKVHKYCILIAASSPYSMYVTECYAYENKNVEQLVGLFLEKNINLSIISPRKIPVLFKLFEKSGGDLGSCSTKNYCKDPRHLVLLKGFSLKERPVSPPANQISHNQAGSMPSPNPNQQQNQQQQQQQQQQQQQQAIGNQNVMDTVGGNMNMNNMGNNPNMRGPMVNQQVGLQQQLQQQQQQQQQPCRMNFPQNNMGNQMFPNQMPNQPGVGGMNYQQQLQQQQQQQQQQQQQQMRWMAPPQGRNFMVGGMNGNQGRPQQQQQQPNQMMGNNAQTNSVLISQLTTPPHSMNAQQQQQQQQMAQGNNPQMRMPFVNSCLQQQQQQPGQPMSQQSLLQQQMMAQQQQQQQNLQVQGMQNQMGVPGNQMGPMGNQMMGGNQQQQQMQQQQQIPNQQQQMGMVQQQQQQQQQQQVQQMGQPGQQQQQMGQQQQQQQQQQQQQQPRERIWSGILEWIEKPNKNDSTKVTRQVPCSVSANIRDGEPETRADNWPPRLIMQLMPKTLVGSAGGQYIKESKTVVFVPQPCEALEALSKVMKSGFAGCVHFTTSPNCDIKVLILLYTAEKNAYLGFIPNNQLAFVDRLKKVIMQNKMQTSNQQQVGQSSGMGNPQASMLPQQQPQQQQQQQQQQQQQQQQQQQANQQQMMGGPMGPGPGQMVPGPGQMVPGGMQQGPRMGGMVNVSP
Length808
PositionUnknown
OrganismAedes albopictus (Asian tiger mosquito) (Stegomyia albopicta)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Culicoidea> Culicidae> Culicinae> Aedini> Aedes> Stegomyia.
Aromaticity0.05
Grand average of hydropathy-0.931
Instability index65.12
Isoelectric point8.81
Molecular weight90284.64
Publications
PubMed=26483478

Function

Annotated function 
GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07839
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     398.70|      47|      47|     277|     323|       1
---------------------------------------------------------------------------
  236-  270 (62.10/10.08)	......NQAGS...MPSPNPNQQQNQQQQQQQQQQQQQQAIG....NQ
  277-  323 (104.35/22.95)	GGNMNMNNMGNNPNMRGPMVNQQVGLQQQLQQQQQQQQQPCR.MNFPQ
  327-  372 (84.02/16.76)	GNQMFPNQMPNQPGVGG..MNYQQQLQQQQQQQQQQQQQQMRwMAPPQ
  483-  522 (71.69/13.00)	QG.M.QNQMGVPGNQMGPMGNQMMGGNQQQQQMQQQQQIPNQ......
  727-  767 (76.53/14.48)	GQS...SGMG.NP.Q.ASMLPQQQPQQQQQQQQQQQQQQQQQ.QQANQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      84.21|      24|      25|     523|     547|       2
---------------------------------------------------------------------------
  444-  470 (41.13/ 7.18)	VNSCLQQQQQQPGQPMSQQsllQQQM.M
  529-  556 (43.08/10.71)	VQQQQQQQQQQQVQQMGQPgqqQQQMgQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.53|      24|      26|     645|     670|       6
---------------------------------------------------------------------------
  632-  662 (36.65/27.04)	GSAGGQ....yikesktVV.............FVPQPCEA.LEALSKVM
  665-  713 (20.88/ 6.03)	GFAGCVhfttspncdikVLillytaeknaylgFIPNNQLAfVDRLKKVI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      62.22|      15|      18|     769|     783|       7
---------------------------------------------------------------------------
  769-  783 (34.19/12.46)	QMMGGPMGPGP..GQMV
  788-  804 (28.03/ 8.85)	QMVPGGMQQGPrmGGMV
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07839 with Med25 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ERIWSGILEWIEKPNKNDSTKVTRQVPCSVSANIRDGEPETRADNWPPRLI
2) NKMQTSNQQQVGQSSGMGNPQASMLPQQQPQQQQQQQQQQQQQQQQQQQANQQQMMGGPMGPGPGQMVPGPGQMVPGGMQQGPRMGGMVNVSP
3) PVSPPANQISHNQAGSMPSPNPNQQQNQQQQQQQQQQQQQQAIGNQNVMDTVGGNMNMNNMGNNPNMRGPMVNQQVGLQQQLQQQQQQQQQPCRMNFPQNNMGNQMFPNQMPNQPGVGGMNYQQQLQQQQQQQQQQQQQQMRWMAPPQGRNFMVGGMNGNQGRPQQQQQQPNQMMGNNAQTNSVLISQLTTPPHSMNAQQQQQQQQMAQGNNPQMRMPFVNSCLQQQQQQPGQPMSQQSLLQQQMMAQQQQQQQNLQVQGMQNQMGVPGNQMGPMGNQMMGGNQQQQQMQQQQQIPNQQQQMGMVQQQQQQQQQQQVQQMGQPGQQQQQMGQQQQQQQQQQQQQQP
572
716
225
622
808
570










Molecular Recognition Features






MoRF SequenceStartStop




NANANA