<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07834

Description Uncharacterized protein
SequenceMASSSNVNGNLVDELEEAFQSCIHALTKEESSTGVDKDEIKLEVDQTTLKFIDLARQMEAFFLQKRFLLSALKPDLLLKEENFDLKQEIARKDELIRKHYEKIESWKNLLSDQQNYNKPIQSLPPEMRGNMPGGVPGGPGMMPGGMGMPMQNSMQVQQMQQAQQQQMHMLQAQQMQQQMQSMPLGANPQMFPQPGGGRGVGAGGPGFQQSPNLQGPLAYLEKTASNIVSLVVKAMDRQSGDSGFDSRSGREIFSTPWA
Length258
PositionHead
OrganismAedes albopictus (Asian tiger mosquito) (Stegomyia albopicta)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Culicoidea> Culicidae> Culicinae> Aedini> Aedes> Stegomyia.
Aromaticity0.06
Grand average of hydropathy-0.612
Instability index63.23
Isoelectric point5.33
Molecular weight28633.30
Publications
PubMed=26483478

Function

Annotated function 
GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07834
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     150.41|      42|      58|     109|     155|       1
---------------------------------------------------------------------------
  109-  155 (71.62/35.47)	LLSDQQnYNKPIQSLP....PEMRgNMPGgvpGGPGMMPGGMGMPMQNSMQ
  169-  214 (78.79/28.08)	MLQAQQ.MQQQMQSMPlganPQMF.PQPG...GGRGVGAGGPGFQQSPNLQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.01|      16|      19|      59|      77|       2
---------------------------------------------------------------------------
   53-   74 (17.24/17.34)	DLArqmEAFFLQKRFllsALKP
   75-   93 (21.77/12.72)	DLLlkeENFDLKQEI...ARKD
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07834 with Med28 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) QNYNKPIQSLPPEMRGNMPGGVPGGPGMMPGGMGMPMQNSMQVQQMQQAQQQQMHMLQAQQMQQQMQSMPLGANPQMFPQPGGGRGVGAGGPGFQQSPNLQGPLAY
114
219










Molecular Recognition Features






MoRF SequenceStartStop




1) IFSTPWA
252
258