<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07829

Description Uncharacterized protein
SequenceMATDTQIIKLVEEILCEKTNDYDYEGPMPDEAELAKRAEDGMKKFGTVFAGMSQETKENALRSCLIHVAGINHRNKVRKHMQVLRDLVAKGIIPARLLCEQIMSSEKLVYQNQSFWIECFQVVRRVIGGVDYKGVREIMKCCKEKALSFPAGISSSILPQMLELTEVIEHIFNRNACLLPAYFIINEIQKADYQDTHWRIANLIANFIEEFVIVAQMLSIIGHSSMLPIVEHSSYADNLINPWKLDPNTLKLALRGNLPYEPELLQPQIKLLRFVLEQPYSRDMVCSMLNLQKTQKQKCMALEEQLVWLVMCAMECSEKEPVHTTVDDEVSSHTQWVWLHLSSQLIYFVLFQFATFQNIVNTLHDKLAVSNLRRGRDHLMWVLLQYISGSIQRNSITNFLPILKLYDILYPEKEPLPVPDYNNPLCTHQMAPTCIWIHLLKRAQSEHYNINRPIPTALKLHHDFLQHLVLPNNNATLCLGSDYRLALLCNAYSTNPDYFSRPMAALIETILGNCKNQSAGSGGSTSTQSLPTVPLSMCVLDSLTIHSKMSLIHSIVTHMIKQAQNKSATLPNSNNMAPALVETYSRLLVYTEIESLGIKGFLGQLLPQVFKSAAWGILYTLLEMFSYRMHHIQPHYRVQLLSHLHSLASVPHTNQMQLHSCVESTALRLITGLGSVEVQAQMTRYVNEQKAPGNIVSAESEELNRALILTLARSMHITGTGNDTQSTTWCKELLNSIMQNTPHTWSQHTLQCFPPVLNDLVVQHNVPKENKQLLKKSVDEEYRNWTSMSNENDIIGHFGSAGTPGTPPLFLCLLFKMIVETDTISPVAYKILERIGARALSAHLRKLCDYLVFEVSNSADGAHVNKCVDTINDMIWKYNIITIDRLVLCLSLRTLEGNEAQVSFCIIQLLLLKTSEFRNRLQEFVSINSPEHWKQNNWHERHLAFHQKFPEKFTPDESVSHPSLPVYFGNVCLRFLPVLDITIHRYLEVPATMSKTLDVLLDHLGPLYKFHDRPITYLYNTLHYYERMLRDRPPLKKRLVGTVIGSLKDVRPDNWAVTEQYQSYMAKKDEAVNWVPDLNYYIYLVRRMQDTIDGTNVFPGTDWRFNEFPNPPAHALYVTCVELLGLPVGPQGVANSLIDVVVKGYPVIPAQSVHNWINTIGLIMAALPESYWGVIYERLREVISCSQMTKWMHRQSPFELFNFKIVREAMLEKSYVLILAIAQSILHHSGIGQIATVTDYIKENFKPIIKTEYQLINLCHLVGPFLNRLSTERPRAVSDITLILYELLEQVDKAQPSIALKYMDPICDLLYHIKYMFIGDMMKSDLEAIIRRLRPALQMRLRFITRLNVDEIGVDQQNVDASSVTGQGTTGPGGPQSQQQPLGGAGQGGGQPAVAQQQQQQQQQQQPQQQQVQVQQQ
Length1417
PositionTail
OrganismAedes albopictus (Asian tiger mosquito) (Stegomyia albopicta)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Culicoidea> Culicidae> Culicinae> Aedini> Aedes> Stegomyia.
Aromaticity0.08
Grand average of hydropathy-0.141
Instability index47.44
Isoelectric point6.77
Molecular weight161504.91
Publications
PubMed=26483478

Function

Annotated function 
GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07829
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.14|      15|      17|    1366|    1380|       1
---------------------------------------------------------------------------
 1366- 1380 (30.74/19.14)	GQGTTGPGGPQSQQQ
 1386- 1400 (29.41/17.98)	GQGGGQPAVAQQQQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      41.44|      11|      17|    1125|    1135|       2
---------------------------------------------------------------------------
 1125- 1135 (22.38/13.86)	GLPVGP.QGVAN
 1144- 1155 (19.07/10.58)	GYPVIPaQSVHN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     198.39|      62|     579|     399|     539|       3
---------------------------------------------------------------------------
  454-  517 (104.34/166.96)	IPTALKLHHDFLQHLVLPNNNATLCLGSDYRLA.LLCNAYSTNPDYfsRPMAAL.IETILGNCKNQ
  545-  608 (94.05/28.64)	IHSKMSLIHSIVTHMIKQAQNKSATLPNSNNMApALVETYSRLLVY..TEIESLgIKGFLGQLLPQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.46|      15|      17|    1054|    1068|       4
---------------------------------------------------------------------------
 1054- 1068 (27.69/17.85)	NWAVTEQYQSYMAKK
 1073- 1087 (28.77/18.86)	NWVPDLNYYIYLVRR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     109.72|      36|     574|     274|     318|       5
---------------------------------------------------------------------------
  274-  318 (57.69/54.83)	FVLEQPYSRDmvCSMLNlqktqkqKCMALEEQLVW.........LVMC....AMECSE
  851-  899 (52.02/30.80)	LVFEVSNSAD..GAHVN.......KCVDTINDMIWkyniitidrLVLClslrTLEGNE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      85.19|      25|     573|      61|      85|       6
---------------------------------------------------------------------------
   61-   85 (45.26/30.10)	LRSCLIHVAGINHRNKVRKHMQV....LR
  640-  668 (39.93/25.64)	LLSHLHSLASVPHTNQMQLHSCVestaLR
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07829 with Med23 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) NVDASSVTGQGTTGPGGPQSQQQPLGGAGQGGGQPAVAQQQQQQQQQQQPQQQQVQVQQQ
1358
1417










Molecular Recognition Features






MoRF SequenceStartStop




1) QQQPLGGAGQGGGQPAVAQQQQQQQQQQQPQQQQVQVQQQ
1378
1417