<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07825

Description Uncharacterized protein
SequenceMSVQQYCLRWNNHQPNFISVFSTLLHNESLVDVTLAAEGRQLQAHKVVLSACSSYFQSLFTANPCQHPIVILKDVQYNDLKTMVDFMYYGEVNVSTEQLPQVLKTAEMLKIKGLAEMPDASAVCKADPSKLEHPDLVGAGLGPGGTGGPESMWGSAESQQQQAAAQQQQQQQQQQQQYHQQLQAQQTQLRRTPSPTTNMSPAARRKRLRKTSTGSGSLSTERIQQQHHQHQQQQQEEHGTNADGTINIVPHLHIQQQVDNISYSTGHSALASLAGAAGGAGNNIRIIKESPSSDVDQQQHESSQESVDEAGHHMPSIIKTEDLSGVTQTIPMDISATSTSVAAVNIPQSQSQHSGDNGACHVKLKVNVGKMREVFTAIVCIHGRSNMPLRLLKFMQISEYWWNMIRRGFTHWCVEAMRKEESRKQLLEESLEEYLDEILEELLKEFMEVSLKQFL
Length455
PositionTail
OrganismAedes albopictus (Asian tiger mosquito) (Stegomyia albopicta)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Culicoidea> Culicidae> Culicinae> Aedini> Aedes> Stegomyia.
Aromaticity0.05
Grand average of hydropathy-0.556
Instability index59.85
Isoelectric point6.05
Molecular weight50784.47
Publications
PubMed=26483478

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07825
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      84.61|      22|      55|     166|     187|       1
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  166-  187 (41.65/15.45)	QQQQQQQQQQQQYHQQLQAQQT
  224-  245 (42.96/16.11)	QQQHHQHQQQQQEEHGTNADGT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.79|      16|      18|     420|     435|       2
---------------------------------------------------------------------------
  420-  435 (26.10/18.37)	EESRKQLLEESLEEYL
  440-  455 (26.69/18.92)	EELLKEFMEVSLKQFL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.83|      14|      15|     330|     343|       4
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  330-  343 (23.10/12.51)	IPMDISATSTSVAA
  346-  359 (25.73/14.68)	IPQSQSQHSGDNGA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.84|      13|      16|     188|     200|       5
---------------------------------------------------------------------------
  188-  200 (23.70/16.76)	QLRRTPSPTTNMS
  207-  219 (21.13/14.16)	RLRKTSTGSGSLS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07825 with Med15 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) AVCKADPSKLEHPDLVGAGLGPGGTGGPESMWGSAESQQQQAAAQQQQQQQQQQQQYHQQLQAQQTQLRRTPSPTTNMSPAARRKRLRKTSTGSGSLSTERIQQQHHQHQQQQQEEHGTNADGTINIVPHLHIQQQVDNISYSTGHSALASLAGAAGGAGNNIRIIKESPSSDVDQQQHESSQESVDEAGHHMPSIIKTED
122
322










Molecular Recognition Features






MoRF SequenceStartStop




1) IRIIKE
284
289