<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07820

Description Uncharacterized protein
SequenceMSGQYPSGYQSPSGHRGNFNSPMMQQQMNQMGGVPNQMGLMGFNQSNVMSNQQQMQSGGVQGGPDMGMGQNIQQQQQQQQPNPNQATGQGQQQQPGPGQAQQQQQQQQQNPQQSPQLGMAGGQAVSSGAQTATGGGAPPGQPNAGPVANTQGASNVQQKEFNLLTLCRIGQETVQDIVSRFQEVFGLLRGIQPPNGTNAGLSSSNDKKAKVQEQFRTIRLLFKRLRLLYDKCNDNCQQGMEYTHVESLIPLKGEPERAEPVHTEEYKKALQENRELIEIVMLKNKQLREIIDKIRLTIWEINTMLSMRRC
Length310
PositionHead
OrganismAedes albopictus (Asian tiger mosquito) (Stegomyia albopicta)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Culicoidea> Culicidae> Culicinae> Aedini> Aedes> Stegomyia.
Aromaticity0.04
Grand average of hydropathy-0.885
Instability index60.39
Isoelectric point8.90
Molecular weight34233.06
Publications
PubMed=26483478

Function

Annotated function 
GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07820
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     172.90|      27|      28|      59|      85|       1
---------------------------------------------------------------------------
   14-   37 (42.42/11.80)	GH.RGNFNSPM...MQQQMNQMGGVPNQ
   59-   85 (57.26/18.51)	GV.QGGPDMGMGQNIQQQQQQQQPNPNQ
   90-  111 (41.21/11.26)	GQ.QQQP..GPGQ.AQQQQQQQQQNP..
  136-  162 (32.01/ 7.10)	GApPGQPNAGPVANTQGASNVQQKEFN.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     136.70|      47|      60|     181|     231|       2
---------------------------------------------------------------------------
  181-  231 (67.22/55.19)	FQEVFGL..LRGiqPPNGTNaGLSSSNDKKAkVQEQFRTIRLLF...KRLRLLYDK
  242-  293 (69.48/42.60)	YTHVESLipLKG..EPERAE.PVHTEEYKKA.LQENRELIEIVMlknKQLREIIDK
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07820 with Med30 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) MSGQYPSGYQSPSGHRGNFNSPMMQQQMNQMGGVPNQMGLMGFNQSNVMSNQQQMQSGGVQGGPDMGMGQNIQQQQQQQQPNPNQATGQGQQQQPGPGQAQQQQQQQQQNPQQSPQLGMAGGQAVSSGAQTATGGGAPPGQPNAGPVANTQGASN
1
155










Molecular Recognition Features






MoRF SequenceStartStop




NANANA