<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07818

Description Uncharacterized protein
SequenceMKIKRESVWRNYESNSLNKFRKQSTNETPEKSLKEFRETTQKSKRISKEILAEIPEESLKVSKYKSRNSSGGGSSGSGHTGGSDIEKLKQEFHPSSSSAPTTPLSNVAQSPTGGNDFSLPFNKLPGDVSPLHSSMLPNVIQKMFPGHDSSTLMRRSPNLDHQSSGWILLDLWERFHNAHDPYQIGSASFPFACRYAKPRHGFLEQQRLGRTVYGPRGKLSKSFRHLDIYKVSKKKLMVEKWFGAKNKIVAVRTVCSHIDL
Length260
PositionMiddle
OrganismAedes albopictus (Asian tiger mosquito) (Stegomyia albopicta)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Culicoidea> Culicidae> Culicinae> Aedini> Aedes> Stegomyia.
Aromaticity0.08
Grand average of hydropathy-0.787
Instability index58.03
Isoelectric point9.95
Molecular weight29333.94
Publications
PubMed=26483478

Function

Annotated function 
GO - Cellular Component
ribosome	GO:0005840	IEA:InterPro

GO - Biological Function
rRNA binding	GO:0019843	IEA:InterPro
structural constituent of ribosome	GO:0003735	IEA:InterPro

GO - Biological Process
translation	GO:0006412	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07818
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      87.51|      27|      29|      57|      84|       1
---------------------------------------------------------------------------
   57-   84 (43.69/23.56)	ESLKvSKYKSRNSSGGGSSGS....GHTGGSD
   86-  116 (43.82/20.10)	EKLK.QEFHPSSSSAPTTPLSnvaqSPTGGND
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      57.24|      15|      15|      16|      30|       2
---------------------------------------------------------------------------
    2-   13 (14.41/ 6.94)	...KIK..........RESVWRNYE
   16-   30 (26.51/18.38)	SLNKFR..........KQSTNETPE
   32-   56 (16.32/ 8.75)	SLKEFRettqkskrisKEILAEIPE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.58|      17|      30|     132|     148|       3
---------------------------------------------------------------------------
  132-  148 (32.61/24.46)	HSS...MLPNVIQKMFPGHD
  161-  180 (26.97/19.07)	HQSsgwILLDLWERFHNAHD
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07818 with Med1 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ESLKVSKYKSRNSSGGGSSGSGHTGGSDIEKLKQEFHPSSSSAPTTPLSNVAQSPTGGNDFSLPFNK
2) YESNSLNKFRKQSTNETPEKSLKEFRETTQKSKRISKEILA
57
12
123
52










Molecular Recognition Features






MoRF SequenceStartStop




1) RISKEILAEIPEESLKVSKYKSRN
2) VWRNY
45
8
68
12