<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07801

Description Uncharacterized protein
SequenceMASADPTKSLFTTQTEKPNHYTYLKEFRVEQCPSFLQHKCNQHRPFVCFNWHFMNQRRRRPVRRRDGSFNYSADNYCPKYDETTGICPDGDDCPFLHRTAGDTERRYHLRYYKTCMCVHDTDARGYCVKNGHHCAFAHGIHDQRPPVYDIKELEALQNAEVTGEGGLNGPNVLDKERNLMNEDPKWQDTNYVLAHYKTEPCKRPPRLCRQGYACPQFHNSKDKRRSPRKYKYRSTPCPNVKHGEEWGEPANCEAGDNCQYCHTRTEQQFHPEIYKSTKCNDVQQAGYCPRSVFCAFAHVEPYVVTEEMSLRGELDSQTLSDMLSSVLPTGDGCGAAGGAPGSSVLSALGGNAGSVPGTGAGSIGSGVKKEVTHDLANLSYFQLLQNGSAESSESASTSSLGSNHSSHNKAPGAQLQQKNNGTGSNNSSMLGNNGHGSSGGGNGAGPLCGLGLLSNGGAGANGVNGGVPTSGSSLLSSIDFNSDLPKQLVAIENDLTLNPLNPLERKRIWSQLCNIGSPLDGGMFELGRRETIHGLDNPISSGLASTGLLASSSAPVNIPGSPMGNSISGMLQGTSAPVNIPGSSLGHNFSPSSHSNLFGLNDPFGGPPSHHHHHHIGSGSAPKLGNRGNSYGGHNHTDNLFFQSHIISPGLAVQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQILNWEEHVLHATNACEAWKAQMEESNRKTAIAEQQRDEALSHVKALKEKLEQLSIGGGSSISNHRTNDLRGMSLPKLKSIQAKLRAEIEEVEKVLYLETATKCMKCEENNRSVTLVPCNHYVLCDACAATQRECPYCQTPVASQT
Length875
PositionTail
OrganismAnopheles albimanus (New world malaria mosquito)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Culicoidea> Culicidae> Anophelinae> Anopheles.
Aromaticity0.06
Grand average of hydropathy-0.892
Instability index64.29
Isoelectric point6.96
Molecular weight96450.35
Publications









Function






Annotated function


GO - Cellular Component
cytoplasm	GO:0005737	IEA:UniProtKB-SubCell

GO - Biological Function
metal ion binding	GO:0046872	IEA:UniProtKB-KW

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07801
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     191.74|      15|      15|     654|     668|       1
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  654-  668 (38.35/12.09)	QQQQQQQQQQQQQQQ
  670-  684 (38.35/12.09)	QQQQQQQQQQQQQQQ
  685-  699 (38.35/12.09)	QQQQQQQQQQQQQQQ
  700-  714 (38.35/12.09)	QQQQQQQQQQQQQQQ
  716-  730 (38.35/12.09)	QQQQQQQQQQQQQQQ
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|      95.80|      18|      21|     547|     564|       2
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  397-  411 (22.29/ 7.63)	TSSLG.......SNHSSHNKAP
  436-  448 (22.84/ 8.00)	GSS......GG.GNGAGP..LC
  516-  533 (23.78/ 8.64)	GSPLD....GGMFELGRRETIH
  560-  581 (26.89/10.74)	GSPMGnsisGMLQGTSAPVNIP
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      70.39|      23|      34|     755|     780|       3
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  755-  780 (32.50/28.36)	SNRKTaiaEQQRDEALSHVKALKEKL
  792-  814 (37.88/24.63)	SNHRT...NDLRGMSLPKLKSIQAKL
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.21|      15|      21|     324|     344|       4
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  324-  344 (17.97/20.94)	SSVlPtgdGCGAagGAPGSSV
  353-  367 (29.25/11.75)	GSV.P...GTGA..GSIGSGV
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     230.94|      38|      39|      57|      95|       5
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   35-   94 (54.97/37.75)	FlqhkcnqhrpfvcfnwhfmnqRRRRPVRRRdGSFNYSADNY....CP..KYDETTG...IC.PDGDDCP
   95-  135 (57.64/34.92)	F...................lhRTAGDTERR.YHLRYYKTCM....CV..HDTDARG...YCvKNGHHCA
  200-  221 (32.05/15.54)	......................PCKRP....................P..RLCRQGY...AC.PQFHNSK
  222-  259 (49.29/28.60)	D.....................KRRSP.RK....YKYRSTP.....CPnvKHGEEWGepaNC.EAGDNCQ
  260-  295 (36.98/19.27)	Y..................chtRTEQ.........QFHPEIYkstkCN..DVQQ.AG...YC.PRSVFCA
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      31.00|      13|      44|     582|     598|       7
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  593-  618 (12.52/12.23)	SHSNLF..GlndpfggppSHHHhhhiGS
  620-  634 (18.48/ 6.38)	SAPKLGnrG.........NSYG....GH
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      36.64|      12|      29|     421|     434|       8
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  421-  434 (19.23/16.73)	GTG..SNnsSMLGNNG
  449-  462 (17.42/ 7.38)	GLGllSN..GGAGANG
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07801 with Med15 domain of Kingdom Metazoa
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