<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07787
Description |
Mediator of RNA polymerase II transcription subunit 17 |
Sequence | MKRVVWCILVFLTFAATSSKPNTKPVHPNAPESADISGFALEIILSRLETLQHDVERQRESIVENQTQLQQTHELLGKMRQDMQQKQSEAQKSIANIRGVLSEDVRQKLTNLERDHRQMRNALLDIQLVSGQYKIRANEVSLPFRAHCEQEQFDGGWLIIQHRFDGTLHFNRSWTDYRNGFGDVTGEHWLGLEKVYQFTKEHKCELVVQMMESNGTLQFARYNAFAIGSEAEGYNLIILGTYSGTADILAGHKGMKFSTPDRDNDPDDRHHYALENYGGWWFHNGQNPVEAPIENQIQEISYDGTETYQLPPTLSEHLAKCAAKIDFSKTSSDIDLLQQSIKKEDEKKEEESKDPKEQFQSSLWPWDSVRNKLKEALTEVCVLSDVLHIAKEKRFMVLDPIPQEPPEVKPMVLVYARKKALASAANILQSGVERLKAAQSDQGVNRSNSTDFHIELLRLRRNWRLKKVSNTIIGDLSYRTAGSKFMHPGMFEVTKAEDEESGSPPASPSGAGAAGTVACPKINSALRVNVPTELQGVAFIKVITQKDQEDLCTATLNMMGSTQLVPQAGAWQQTLEYAQNVLFCKELFNQLAREAVQLQAPIPHVVVGNQIRATLLPGIQLIISLCHSTSSDSNNSSEPIKDHDHVLEHSLHQLLREFHHKNTHHPFPHPASGPLGPSKKRMLAGPSAFDRHELLEMTKSQTLLEQIIAQAQHIFTRRRTQYVLDTLARDVKDPLITSHWNAMNSPTMSCVKINITSHGYDANLRTSLVIHVKERSLKCICRDGRIMHMSYEPQELRDLILCQISQHQIVCLQNLAKCMAWQILSSSSHLGIGAVEPLGNASSCVLASPNSDRLIAVQVRCDSQIDVKVYIAQSPAKDFFPGSLVQGRHWEHLGGHFKEVRFDKMEGKNFHNKMEFLMASLTSQS |
Length | 925 |
Position | Head |
Organism | Anopheles albimanus (New world malaria mosquito) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota>
Neoptera> Endopterygota> Diptera> Nematocera> Culicoidea> Culicidae>
Anophelinae> Anopheles.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.443 |
Instability index | 50.60 |
Isoelectric point | 6.66 |
Molecular weight | 104328.41 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364140
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP07787
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 63.40| 18| 152| 138| 155| 2
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138- 155 (33.17/22.18) NEVSLPFRAHCEQEQFDG
287- 304 (30.23/19.54) NPVEAPIENQIQEISYDG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 58.13| 20| 27| 54| 80| 5
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54- 76 (26.85/31.91) DVERQREsivENQTQLQQTHELL
82- 101 (31.27/15.07) DMQQKQS...EAQKSIANIRGVL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 50.49| 15| 46| 158| 172| 8
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158- 172 (29.08/18.69) LIIQ.HRFDGTLHFNR
206- 221 (21.41/11.89) LVVQmMESNGTLQFAR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 60.38| 18| 247| 551| 572| 9
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551- 568 (30.84/26.40) LCTATLNMMGSTQLVPQA
583- 600 (29.54/12.92) FCKELFNQLAREAVQLQA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 139.27| 44| 162| 671| 715| 10
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671- 715 (72.27/54.35) ASGPLGPSKKRMLAGPSAfDRHELLEM.TKSQTLLEQIIAQ..AQHIF
834- 880 (67.00/44.95) AVEPLGNASSCVLASPNS.DRLIAVQVrCDSQIDVKVYIAQspAKDFF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 56.94| 18| 29| 748| 775| 11
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748- 765 (32.41/34.63) MSCV..KINITSHGYDA.NLR
777- 797 (24.53/ 6.81) LKCIcrDGRIMHMSYEPqELR
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