<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07783

Description Uncharacterized protein
SequenceMSIPMGCSINGLSSRQDTASPSDTACSSESPAFLGPPASAAHLLLYDQNSSEEELEVINGGAGAVGNCDIIEVGSVSGVPSRIGAGPAGLCGRVAGIDQLPMMSDGADEEDDEEEDDATEEIIDEGEDDEDDDDEEDEEVASAIASATTATTVTTVKPKVATTIIGSAGRRPMDTSVRGHFVSLAAGGAIGGLDDVFADGESLDDFADELCLASSSDDAPMAFNGMLNVKTVSSSGKQHQHQPQHQQQQRFSTLLEKRKRSLAQNSDDEVRFLLEQQQQTPLHQAHHPNHHLHHPHHQHHSLRHHQQQQQQSKQHHQQQQQQQQQQHLHQQHQLLQQEQLTEESLLSAPVNFRTSPPLEALKPHRGHILQRSTTPLILTESGSHGGSGSGLLLPGSGSGSLLSSTTSSLSSLLSGCGSSASTGGGSSGFYEPGLAGGGGIESQQQQRSSAVSAPASSASSNLVTNMDVSRSVSPPAKMFHCAVSPRRRAPRHQQQRLQRPHRPCLDFDKMQQLKARSVTTWRHSNEHSGELSVFCW
Length536
PositionTail
OrganismAnopheles albimanus (New world malaria mosquito)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Culicoidea> Culicidae> Anophelinae> Anopheles.
Aromaticity0.03
Grand average of hydropathy-0.665
Instability index68.26
Isoelectric point5.33
Molecular weight57398.04
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07783
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     133.95|      19|      19|     303|     321|       1
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  237-  250 (20.37/ 6.80)	.....KQHQHQPQHQ...QQQR
  257-  278 (19.37/ 6.06)	KRKRSLAQNSDDEVRfllEQQQ
  281-  299 (35.29/17.80)	PLHQAHHPNHHLHHP...HHQH
  303-  321 (38.22/19.97)	RHHQQQQQQSKQHHQ...QQQQ
  322-  339 (20.70/ 7.04)	...QQQQQHLHQQHQ.llQQEQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.30|      19|      19|     389|     407|       2
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  365-  383 (25.77/ 9.92)	RGHILQRSTTPLILTESGS
  389-  407 (31.53/13.68)	SGLLLPGSGSGSLLSSTTS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.05|      16|      19|     102|     117|       3
---------------------------------------------------------------------------
  102-  117 (30.14/20.13)	MMSDGAD.EEDDEEEDD
  122-  138 (24.92/15.38)	IIDEGEDdEDDDDEEDE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.79|      15|      20|      61|      80|       4
---------------------------------------------------------------------------
   61-   80 (24.59/28.69)	GAGAVGNCdiievGSVSGV...P
   84-  101 (26.20/16.83)	GAGPAGLC.....GRVAGIdqlP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     128.96|      39|      48|     408|     447|       5
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  408-  447 (63.60/37.87)	SLSS.LLSGCGSSASTGGGSSGFYePGLAGGGGIESQQQQR
  457-  496 (65.37/35.10)	SASSnLVTNMDVSRSVSPPAKMFH.CAVSPRRRAPRHQQQR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.31|      14|      18|     144|     159|       6
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  144-  157 (21.46/18.39)	IASATTATTVTTVK
  165-  178 (24.85/12.74)	IGSAGRRPMDTSVR
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07783 with Med15 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) DDAPMAFNGMLNVKTVSSSGKQHQHQPQHQQQQRFSTLLEKRKRSL
2) PPAKMFHCAVSPRRRAPRHQQQRLQRPHRPCLDFDK
3) QNSDDEVRFLLEQQQQTPLHQAHHPNHHLHHPHHQHHSLRHHQQQQQQSKQHHQQQQQQQQQQHLHQQHQLLQQEQLTEESLLSAPVNFRTSPPLEALKPHRGHILQRSTTPLILTESGSHGGSGSGLLLPGSGSGS
4) STGGGSSGFYEPGLAGGGGIESQQQQRSSAVSAPASSASSNLVTNMDVS
5) VAGIDQLPMMSDGADEEDDEEEDDATEEIIDEGEDDEDDDDEEDEEVASAIASATT
217
474
264
421
94
262
509
400
469
149










Molecular Recognition Features






MoRF SequenceStartStop




NANANA