<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07772

Description Uncharacterized protein
SequenceMQTLASSKITLKIIYLSQISPEGCTSKHAQQSAIAADALLGEIGKCCRDFFTQSHKFDKKLPPAAVGKAFRLKDITAYWLISPLVHACPRPGNLPASFPAITIQGKFLKEAAAMLDTSSDNNKERIQQSAWLLSQEPFLNLVLTCLNGEEQQRDGLVGSMLKQLQELALKAKDNPLLPYLRIFSLEREGVLLRISLVGGMFDSVCHTSICDTWALTLFQLMLYGVISKERDGYLFDSCYDMLSTLLIWSITDPMNAAAMNAQDPDTKFRFPTYSLIVKKLRKELNERALIPELRSLMQFLPIPKPQFELITCEPYGTVPTSPQKLGKSQMQGQIMQTTVKANRHGLQFAEKVKLSAFDIVPHLNVDSTLLRRPWSWSMLQAVKLDRLPVPVQRYIQRLVHHSHYNEFVRPTICGMDRPPNLDIYLSPPMMDVSETPATLHHVSSNAVTSTTTSASSTNVVVSSCGTSMDVSATLGSVTQSRTMGYQSSATPSCTSVPDGSTPSGAPGASNAATTMIFPGQGGPMSALPDLTGRGQNNASPRGARGGRRKATGLSTRSQGTTRKQRQQRQQTVDQLAVAAAAAAAAAQQQQQQMTGTGPSQQSTYPGTWATGPQQAGVPQQFASGPSATLTGAGQSGAPMGTQPTEDSKMKIHSMILQKRQAQAASGATATQQGITSAAQPAMQDVNTYQISGRPAQYGGGMVMKVETSATSMQMADHTQQQQQQQQQYVQHQQQQQYIQQQQLIQMQQDTQGASQYIVHHQQQRGSLAYGQQSMQQVAYDSRFNQQQLPYGQQPQQQQQQYHPPQQY
Length807
PositionKinase
OrganismOnchocerca ochengi (Filarial nematode worm)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Nematoda> Chromadorea> Rhabditida> Spirurina> Spiruromorpha> Filarioidea> Onchocercidae> Onchocerca.
Aromaticity0.06
Grand average of hydropathy-0.441
Instability index49.54
Isoelectric point9.20
Molecular weight88446.39
Publications
PubMed=22919073

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07772
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     321.36|     111|     131|     518|     648|       1
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  491-  642 (165.70/95.04)	PSCTSV.....................PdgstpsgapgasnaattmifpGQGGPMSALPDLTGRGQNNASPRGAR.GG....RRKATGLSTRSQGTTRKQRQQRQQTVDqlavaAaaaaaaaQQQQQ........QM.TGT.GPSQ....QSTYPGTWATGPQQAgvpQQFASGpsatlTGAGQSGAPMGTQ
  643-  793 (155.66/63.64)	PTEDSKmkihsmilqkrqaqaasgataT.....................QQGITSAAQPAMQDVNTYQISGRPAQyGGgmvmKVETSATSMQMADHTQQQQQQQQQYVQ.....H.......QQQQQyiqqqqliQMqQDTqGASQyivhHQQQRGSLAYGQQSM...QQVAYD.....SRFNQQQLPYGQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.48|      20|     115|     160|     185|       8
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  160-  185 (24.14/34.46)	MLKQL.QELALKAkdnpLLPYLRifSL
  276-  296 (29.34/18.95)	IVKKLrKELNERA....LIPELR..SL
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     126.94|      39|     116|     230|     271|      11
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  230-  271 (67.47/49.63)	RDGYLFD.....SCYDMLSTLLIWS..ITDPMNAAAMNAQDPDtkfRFP
  343-  388 (59.48/36.19)	RHGLQFAekvklSAFDIVPHLNVDStlLRRPWSWSMLQAVKLD...RLP
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07772 with Med12 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) QYGGGMVMKVETSATSMQMADHTQQQQQQQQQYVQH
2) VSATLGSVTQSRTMGYQSSATPSCTSVPDGSTPSGAPGASNAATTMIFPGQGGPMSALPDLTGRGQNNASPRGARGGRRKATGLSTRSQGTTRKQRQQRQQTVDQLAVAAAAAAAAAQQQQQQMTGTGPSQQSTYPGTWATGPQQAGVPQQFASGPSATLTGAGQSGAPMGTQPTEDSKMKIHSMILQKRQAQAASGATATQQGITSAAQPAMQDVNTYQISGR
696
470
731
693










Molecular Recognition Features






MoRF SequenceStartStop




1) AYDSRFNQQQLPYGQQ
2) IHSMILQKR
3) QQQQYHPPQQY
778
651
797
793
659
807