<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07735

Description Uncharacterized protein
SequenceMANLSSSESHDSSSEPMVDPSSQSSNSSIDSSNSSSESSESSSESSESSSESSESSSESSESSSESSSSESSSSESSSSESSSSESSDSSSKSSDSSSKLSDSDDLRHQQHWHQGDRVVQGFKQLISKYSRNAIIDYRPQQSINANISTVSVDDHVNSKQFLLDRLQSSLLPLLHHQINVLSLALNPSEITDEPGSKLQLISEIQSELERITDQIQHIITSVYPESLCTPHRADDQHLGSLKSYRLCHLKRAFQSYGGGFLGTLCLISRWAYRLIHEMQLSSKKLSRRSSCGVSRDSLDEYIPCALRSIGSAIMILRGSELDVAQNLWPAKLRSMDTIWEMPISIPGINGLRRIRSVSREPALKLAKLSIPIKKLCKIFFLKISRRGINLKALPYSTKMSSVQIESLAGSIVIVKDELHKFHSQLSSGYEEHVDTSRSQLLKMAATLKTHLDTPMVLILSHFVHTTDFPDKEYYHSWFCAWHGLYQLAIHNFTNFVELLGWFM
Length503
PositionKinase
OrganismPuccinia triticina (isolate 1-1 / race 1 (BBBD)) (Brown leaf rust fungus)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Pucciniomycotina> Pucciniomycetes> Pucciniales> Pucciniaceae> Puccinia.
Aromaticity0.06
Grand average of hydropathy-0.416
Instability index74.12
Isoelectric point6.09
Molecular weight55952.83
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07735
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     156.06|      33|      33|      31|      63|       1
---------------------------------------------------------------------------
    6-   41 (53.21/14.86)	SSESHDSSSEPmVDPSSQSSNSSidSSNSSSESSES
   42-   76 (54.28/15.29)	SSESSESSSES.SESSSESSESSseSSSSESSSSES
   77-  103 (48.57/12.99)	SS.SESSSSES.SDSS.....SK..SSDSSSKLSDS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.46|      16|      17|     216|     232|       2
---------------------------------------------------------------------------
  216-  232 (26.86/19.76)	QHiITSVYPESLCTPHR
  236-  251 (29.61/17.14)	QH.LGSLKSYRLCHLKR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      84.52|      27|      37|     142|     170|       3
---------------------------------------------------------------------------
  142-  170 (39.93/24.97)	SINANISTVSvdDHVNSKQFLLDRLQSSL
  182-  208 (44.59/22.61)	SLALNPSEIT..DEPGSKLQLISEIQSEL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     141.26|      37|      38|     338|     374|       4
---------------------------------------------------------------------------
  302-  334 (27.98/12.89)	.......IP..CALRSIGSaimILRGSELDVAQN..LWPakLRS
  338-  374 (63.89/38.24)	IWEMPISIPGINGLRRIRS...VSREPALKLAKL..SIP..IKK
  378-  415 (49.40/28.01)	IFFLKISRRGIN.LKALPY...STKMSSVQIESLagSIV..IVK
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07735 with Med13 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) MANLSSSESHDSSSEPMVDPSSQSSNSSIDSSNSSSESSESSSESSESSSESSESSSESSESSSESSSSESSSSESSSSESSSSESSDSSSKSSDSSSKLSDSDDLRHQQHWHQG
1
115










Molecular Recognition Features






MoRF SequenceStartStop




1) SEPMVDP
2) SSESSSESSESSSESSESSSESSE
14
38
20
61