Description | RNA polymerase II mediator complex component Srb8 |
Sequence | MISHSSSRRPPSRPPAPSRGSSSHSVVPYPASDSYPAIDSRAHQNEVIDLTESDGGGMADIGRPAKRPRLDVGNEPPQSSLDHTHNQHQQQQYQNQDQPSSQHHVSSMTGETPESSMNPLDLMSSSSTEQTGRPPWSFKGEIPRSDAEAQPEASQWPQSSSLPPLPIRPWKYGPQERYLAGTTDSKGGKECGAVKTTPYRIDVPSIAPRFADNKPADFSPWRGSHPEDVLSEQTAKQGFYDRASVSNETTSAKSVVYPQFKNRSGLKLLSSVFAAALEKRQALRTITAASTFRPPPRVTLTDIKREAWLRDLANPSVPLRRLSRTIPHGIRGKVLLDQCLGKSIPICRAIWLAKCVGANELRAFKRKGTSAGVASGLEAKWVRDWTISVQQFVEGVIAGIGDANWRLRISYSIRLLARLFLEHLVEQDHFLEWFLTSFHNSSVENLPVWLLMVGIYWENIVRYRKRGKRLAECLLEKLRLATEADQHAHLNPLTRRLSRLTKTLSLSHPSCFILPRCWDKYENVLSSCLDMNLSDDKAGFQNLKARNARVCRLGNSRRKPTQSTNQRLIQLLDSSSDVSTIGTECLNISQDYSTLATKVIEWASTSFRYGLARIYTAVRVFRRWKKTGIDIDSHLLSFLVQDHRKSGVRFLDVYHVICELVRSQSFSVAKYLQWLMARGSVSNVLGCPQMHIPGDIGLLGHLPSSRLPNHIWNLRNTLLSRTGFLVALEVDTIQRIKASVRRRLPNMFPKAPPEGDAEMTDDVDFSSLSWTVRSEIGNWIRDQVASHVKDSLKSAMDRDFGSEVKTSALIPQEFFEVRYILECLCDLSMLADVLKYASGSDNVTVLASAVDTLNCHLDSFNAIGATSDLFKSFTSAYARISKAELSVQDLIASLLDVAIKLPGELSTVSLLRRDLLQRDRKLAMAACSPVSDHIVDTLNTSNPTFTEELDQLLTSGNSMDESTVARIFDSLCKRLEAGSVNGEQCAHDIARYFAQLRPFNAKLFDNLMIKWVISVLRSSPRPNLSTMLPPLIGVGCVTLHSFYVLARALLHSDVHKSTIPDLAELRISMIQLLDSRLSNGNGSQDLVAYRFKIARQEYMRQFSGEALGLIHDLLAELSEGGTDSLPKQFNSELLSTVVTPLLCEIIVRHPATISADYGIRLLEKFPACINLTDRALGHLLASQVQSGLVAAEETIESINDFSLPLCLMKLRLLFGFECDSNVKKRIYDVVFETAKSNMRKGQSHWIDVVGSLHADAAKEIRQRAEEQLLSHVLTSDSLPTSPTSESNTPPGFNVSALVCLRIVEDLSFSIPETGSPSLCPTLIEKMNMILHRITTLENNLMEANISQDNDHATAIRQAHVVQQSSVIAFWFSVLLRLIAIHRSRFAPGTLSKSDLADQTRLLISINCIALSRTLSPKAPACPRPFPSTSPLTLTTPLQEPRPHFPFHVTDTGISTSLQIQALDVAATLLDSIPDDYRHQCARFLRDRCPPFLHPQNDPRLLFLLGPLAADNQPSPTTTQSSQQQPGGSTLSQANPGTPGTPATPLVVASVGATAASQSSQQFQGGNSYNAATFNPFDDQNSIVGKLRVQQRGRIAGPYPLRPWEMLEESAPVIGVNDTAVNLGWFAARRIRGDVA |
Length | 1635 |
Position | Kinase |
Organism | Blastomyces gilchristii (strain SLH14081) (Blastomyces dermatitidis) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes> Eurotiomycetidae> Onygenales> Ajellomycetaceae> Blastomyces. |
Aromaticity | 0.07 |
Grand average of hydropathy | -0.246 |
Instability index | 50.18 |
Isoelectric point | 8.57 |
Molecular weight | 181174.19 |
Publications | PubMed=26439490 |
Annotated function |
Component of the SRB8-11 complex. The SRB8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The SRB8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex.
Component of the srb8-11 complex. The srb8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The srb8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex.
ECO:0000256 ARBA:ARBA00002895 ECO:0000256 ARBA:ARBA00003744 |
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP07727 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 97.79| 27| 35| 113| 146| 1 --------------------------------------------------------------------------- 113- 144 (43.05/37.36) PESSMNPldlmSSSSTEQTGRPPWSFkGEIPR 151- 177 (54.74/26.53) PEASQWP....QSSSLPPLPIRPWKY.GPQER --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 97.71| 28| 35| 1506| 1533| 2 --------------------------------------------------------------------------- 1506- 1533 (50.18/30.77) PLAADNQPSPTTTQSSQQQPGGSTLSQA 1544- 1571 (47.53/28.71) PLVVASVGATAASQSSQQFQGGNSYNAA --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 467.66| 144| 176| 318| 470| 3 --------------------------------------------------------------------------- 318- 459 (204.63/160.60) .................................PL.RRLSR...TIPHGIRGKVLLDQCLGKSIPIcraiwLAKCVGAN..ELRA.FKR.KGTSAGVASGLEAK.........wVRDWTISV.QQFVEGV.....IAGIGDANW....RLRISYSIRLLARLFLEHLveQDHFLEWFLTSFH......NSSVENLPVWlLMVGIYWEN 460- 633 (180.69/116.39) IVR.YRKRGKRLaeclleklrlateadqhahlnPLtRRLSRltkTLSLSHPSCFILPRCWDKYENV.....LSSCLDMNlsDDKAgFQNlKARNARVCRLGNSR...........RKPTQSTnQRLIQLLdsssdVSTIGTEC......LNISQDYSTLAT..........KVIEWASTSFRyglariYTAVRVFRRW.KKTGIDIDS 639- 717 (82.34/48.12) LVQdHRKSGVRF............................................................................................ldvyhvicelVRSQSFSV.AKYLQWL.....MARGSVSNVlgcpQMHIPGDIGLLGHLPSSRL..PNHI..W...NLR......NT.................. --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 210.70| 75| 117| 832| 907| 4 --------------------------------------------------------------------------- 787- 867 (115.97/72.73) HVKDSLKSAMDRDFGSEVKTSALIPQeFFEVRYILE.CLCD.lsmlaDVL....KYASG.....SDN.VTVLASAVDTLNCHLDSFNAIGATS 868- 959 (94.73/62.62) DLFKSFTSAYARISKAELSVQDLIAS.LLDVAIKLPgELSTvsllrrDLLqrdrKLAMAacspvSDHiVDTLNTSNPTFTEELDQLLTSGNSM --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 59.52| 19| 37| 1067| 1086| 6 --------------------------------------------------------------------------- 1067- 1086 (27.94/23.82) ISMIQLLDSRLSNGnGSQDL 1107- 1125 (31.57/21.26) LGLIHDLLAELSEG.GTDSL --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 54.44| 17| 37| 1153| 1169| 8 --------------------------------------------------------------------------- 1153- 1169 (30.11/23.53) ISADYGIRLLEKF..PACI 1189- 1207 (24.32/17.26) VAAEETIESINDFslPLCL --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 61.73| 20| 105| 1299| 1320| 10 --------------------------------------------------------------------------- 1263- 1289 (24.27/ 9.13) RAEEQLlshvltSDSLPTSpTSESNTP 1301- 1320 (37.46/18.35) RIVEDL......SFSIPET.GSPSLCP --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) ADIGRPAK 2) LPIRPWKYGPQERYLA | 59 165 | 66 180 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab