<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07704
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MTAEKMPLILDNAMPVDLNNVDDLFGDDVPLSLPVRSHSKQLQQRLDELRNRGACQAVAWSRLGTIASLTPDGQTLELRFLRCHPDTGIWELSEPTTSDLVKGTPAIPLVHLEWSSTTSPDLAVIDAAGRVSLVSFAISLNHPFVTRKWETDTVDDLHGIAGCYWLPVAPSNQQKPFNIMYGPANKTGNVYQYESSFVHAIGPNHPHSAKSALFCVTMGGMLKMYWSQNNNRMEETTMELESINTSDELVTHAAFAADKKHLIAAVATSSRQLKILKVEIQWGGPGSSSEKNTMPQNARLNPALVETHVASASWLYAGPNETNYDASMSELSFLHVLPAVLDNSGSSTVPPLIMTVRSRNAGDGSCQSAQSILDRWEAVESKQGLDSAFEQLGNRRNSVSSDLPNTIKLRKLESVMVSKTVIGIQDIQYGKVIILTMSDGSVEYRDRFTFEEIYTNQDVSKVMNLRQVGWVFSDDGPCHQAAFSPTCCSMIQIGDDGKVRWNKLHYPLGDIGNSAQDPHYPATIAAMSITAASSMWHQTSYDDLLAVAHPLASKKRFTPDWISELIRIMKIQIDYSEETHHDSLMRNSPLQSCLSIMSSLGFQGETHRRSFQSKFAIINLNMRNVVILITLASNTPMNIREKMSPLDEHEVVDALAGCAKWSVDLLCWLVDCLFELMNDDHFKQRLNPQRLGELNQYLHERNDVSLHLLLSSSSRSFVSAVCRRISLLEAISNKAIDFYKRQAAGDQTGGGKPPNPQLQQAYQKMQQVTSTSLIKVTEFEKLLNILASDIRQTYTTYLPRVVKNQPNAPQGKQLDVAVKNTQIHFEVAMLLSGSLPPSFLPVINKFFGKDLPAFRKLTDPAKLFFADFELLGLQDDKSSLAARRAKGVYVDIFKRTELRSGRGENRWRRCTRCTAVMEDVFGSRPGFTFVLAQQRKCSCSGYWALLPKGKLVL |
Length | 953 |
Position | Tail |
Organism | Pochonia chlamydosporia 170 |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes>
Hypocreomycetidae> Hypocreales> Clavicipitaceae> Pochonia.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.256 |
Instability index | 49.25 |
Isoelectric point | 6.94 |
Molecular weight | 106223.98 |
Publications | PubMed=27416025
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP07704
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 106.23| 30| 34| 113| 144| 1
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113- 144 (47.47/37.48) EWSSTTSPDLAVIdaAGRVSLVSFAISLNHPF
148- 177 (58.76/39.90) KWETDTVDDLHGI..AGCYWLPVAPSNQQKPF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 135.83| 34| 36| 282| 315| 2
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226- 254 (34.62/19.35) .............WSQNNNRMEETTMElESINTS..DELV.THAA
269- 310 (51.31/32.36) SSRQLkilkveiqWGGPGSSSEKNTMP.QNARLN..PALVETHVA
311- 346 (49.90/31.26) SASWL........YAGPNETNYDASMS.ELSFLHvlPAVLDNSGS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 115.67| 32| 34| 474| 506| 3
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474- 506 (58.21/40.77) DDGPCHQAAFSPTCCSMIQIGDDGKVrWNKLHY
510- 541 (57.46/35.57) DIGNSAQDPHYPATIAAMSITAASSM.WHQTSY
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 119.00| 37| 54| 655| 692| 7
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655- 692 (63.98/49.27) LAGCAKWSVDLLCWLVdCLFELMND...DHFKQRLNPQRLG
710- 749 (55.02/36.85) LSSSSRSFVSAVCRRI.SLLEAISNkaiDFYKRQAAGDQTG
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