<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07679
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MDQDQPDDFASESFFDQNSLQQQIQQIDATADLNAVSSVTLPQNQAVVDKLSRRWYCGCLERIAWSRHGHLASISDDGSTVYLECIRYNYESKSWGLHERHPLTTLFEDATSLAWSPNGGELAVVDVKGRIWIYHNSVLAINRLSLARQGALDEGDEYSQPVGMTWLNQDRQERPRNVVTHALKGDTRWQHANARAKPLGPYWHRAVAIVHRNGLFTLCFQRGDGQYSKVTKQLSPPDDILYSHASFAPTVEGKMLITLHSFQKVISVYFLSIDWSEVKQAIEGLPVLTLESISSKVSSQPSGSPTLADTYDPDSWLLSHLEVVRTSDVEKAVQIPPTILAISSGVNRTVNITDSGFLVSSVVKRWSVTPVEQRLHPLFDALPSTGVGATVPKPGYTLQKQPDKEEQVITTIHHVDGVQAFAITTLENRTDFLSSEDLSPMSYTALVQETASMSQSGFAFPYAQVILTPVFSPNACVRADLTLDGKTQLVAMEYQLGQPQSLQPLDPNVDVALAALNLTFARACWSNATIDDILMCVSQSVPTELIPTVISTVYRTLFRDNDFVNERTDGSELEKFIHKTVIGRVLSYHASLAANCPHLPSIASTDRRHGCWSLSAQWAWLVNNIRQTATLLFVTMRDVQNIQLVMSQDLTDLLCSNLRWGLSLMRFIISTILEVGDRETNPEMFDEKDPGRAGDSHGDGRQGLVALLLNCHPSRIFLIAFVRAVRAYAKNTEPKSNHHLQVLQCIQQQTSGKGLSFQAMEALLEYRWSAVGDVDRDMAATAVRQLEMMATGIVHESYQGTIKVLLNTLFNSPQGLRAKMLIDRAKLFIDHVDLEHIFLNHDILGRRNSDGEPDEKEVIYDVHRKRPILKGVAEPNGSGQLMIRKCLRCGSYSEDVNVPPREWPRQVAMLLMRCVCDGGWVLKPWDEVHK |
Length | 930 |
Position | Tail |
Organism | Fonsecaea erecta |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes>
Chaetothyriomycetidae> Chaetothyriales> Herpotrichiellaceae> Fonsecaea.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.218 |
Instability index | 43.37 |
Isoelectric point | 5.86 |
Molecular weight | 104004.92 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP07679
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 124.89| 40| 562| 305| 366| 1
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228- 275 (56.63/50.22) SKVTKQLSPPDDILYSHASFAPTVEgkmlITLHSFQkVISVYflsIDW
327- 366 (68.27/30.93) SDVEKAVQIPPTILAISSGVNRTVN....ITDSGFL.VSSVV...KRW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 234.17| 71| 89| 524| 610| 3
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105- 142 (44.03/16.61) ...................................TLFED.ATSL..AWSPNGGELAVV...DV..KGRIWIYHNSvLAIN
524- 595 (121.16/106.92) CWS.NATIDDILMCVSQSvPTELIPTV..ISTVYRTLFRD.NDFV..NERTDGSELEKFIHKTV..IGRVLSYHAS.LAAN
611- 676 (68.98/37.90) CWSlSAQWAWLVNNIRQT.ATLLFVTMrdVQNIQLVMSQDlTDLLcsNLRW.GLSLMRFIISTIleVG.............
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 84.78| 26| 89| 370| 397| 4
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370- 397 (43.73/35.90) PVEQR.LHPLFDalPSTGVGATVPKPGYT
461- 487 (41.05/26.65) PYAQViLTPVFS..PNACVRADLTLDGKT
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