<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07619

Description Uncharacterized protein
SequenceMASAGKDNNLELALEIAALPAPQQSGDAAGDGHDPFAPRPRLDDILPPELGGAIYATAEQLCPSLAQRLHRLWHERGDFSKFKRSALHPQQQPAEPQPPLFGVPSPEPSLPSSPAHEGGADSRQENGKTASISVQDAESLKTAMLQRIGNAHFATYFLHNLVALLLQYQTSQRKSQLEQQSAIAQSQVQILSSTQQQQQNASRTDSDPEPSTSAPTQQHQEPYFDPKILGLSEVFPDPSSSSQNQQQHASHNIDDDEEEEQRKEGNPQRQQQQQERDQPVSDEPNIPIDQTAFPALATTRATLLRTSSILRSGSLSIRRVAGSSPSTSTSEQTRWTGLAALKTSSSASWKLAPAPQNVGVGSAVWWGGLSAREDGEAAGAKDAWIGYGLPEVQSRFRRNAMAYFVDEETSTPSAPSIPSNPPAAGTGPLVFLRRPGRRLRLILISPDGIEHVGDSDARRKGLGEELTEGGKAAGIENVLRKAQEELLDEELWSNLLAQVQNTSAVVIRSSSSQPSLNKPAQSSAGGTSTALSTTTTPVSTPAPQLPPPDALIVGVEEEKVDGKDRKRKRRRFGALDAVAALSETEKIEVRLGGGWKLVLEMGREELSSSGPSDEQEGSEHTSPSSALPRILLAYLRLSLLRSIRLRLRARDISSAAATSSTTASATATASSNSKTGASADRGKSQAQLEREAAAASSKRGVGAYELSGSKLKQQQQQQQQQQQQQQQQQQAAAAVGGEKTDAGKEKEKGLGKGTNRESYLDPVLGLLRYATFIADVELVLDALSRRGADADTDGDGELTSTPEQREGGRGSRIWYRLSPLASLVDTSAWLRTLLDEGPQAGGAGLAPPQHASASVSGSTTVATAATTQSHQMDAVRMLSGVGTVFCDDSPLVLINFGYPARLSVQFVRREMVPRWTGELSVDVFRKFMEREVEGALG
Length937
PositionHead
OrganismTilletia controversa (dwarf bunt fungus)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Ustilaginomycotina> Exobasidiomycetes> Tilletiales> Tilletiaceae> Tilletia.
Aromaticity0.04
Grand average of hydropathy-0.589
Instability index64.35
Isoelectric point5.62
Molecular weight100494.13
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07619
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     140.50|      29|      65|      23|      53|       1
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   23-   51 (51.29/19.42)	QQSGDAAGDGHDP....FAPRPRLDDI..LPPELG
   74-  102 (49.85/16.93)	HERGDFSKFKRSA....LHPQQQPAEP..QPPLFG
  196-  230 (39.36/12.60)	QQQQNASRTDSDPepstSAPTQQHQEPyfDPKILG
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     347.65|      92|     451|     239|     332|       2
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  239-  332 (143.71/85.77)	SSSSQNQQQHAS...........HNIDDDE......EEEQRKEGNPQRQQQQQ................ERDQPVSDEPNIpIDQTAFPALATTR.ATLLRTSSILRSgSLSIRRVA.....GSSPSTSTSEQ
  595-  664 (99.55/51.32)	.....WKL.................VLEMG......REELSSSG.PSDEQEGS................EHTSPSSALPRI........LLAYLR.LSLLR.SIRLR...LRARDIS.....SAAATSSTTAS
  676-  804 (104.39/54.20)	GASADRGKSQAQlereaaaasskRGVGAYElsgsklKQQQQQQQQQQQQQQQQqqaaaavggektdagkEKEKGLGKGTN..RESYLDPVLGLLRyATFIADVELVLD.ALS.RRGAdadtdGDGELTSTPEQ
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      77.12|      15|     126|     410|     424|       3
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  108-  120 (19.95/ 6.43)	..PSLPSSPAHEGGA
  410-  424 (31.04/14.00)	STPSAPSIPSNPPAA
  539-  550 (26.14/10.65)	STP.APQLP..PPDA
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     151.12|      52|     330|     468|     536|       4
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  468-  536 (74.54/65.26)	EGGKAAGIenvlrkaqeelldeelWSNL..LAQVQNTSAVvIRS......SSSQPSLNKPAQSSAG..GTSTALSTTTT
  806-  867 (76.58/39.93)	EGGRGSRI................WYRLspLASLVDTSAW.LRTlldegpQAGGAGLAPPQHASASvsGSTTVATAATT
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07619 with Med17 domain of Kingdom Fungi
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