<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07611

Description Uncharacterized protein
SequenceMAADYWRSSQCHNWQFTHEQLALARLEDARFASPLELSAIGIWIGNTVSELCKRLVLRQRVTATATVFARRFYAKNSYSATDPCLVCASCVYVAAKVEEMPIHVKQVVTEAMRLFAETSAGKFAFPSDRAVLAEMEFYLIEDLEFDLIIHHPYRALVSIYDAIGNDSKKQQQQQQQHQHQQQQQHHAGMGHLHGHGLDPSDSPASDAFSQHLAGVNAAEEMGSAGGYIGSGSTLGGAGASVGGMDGFGIRGSMLGPGEWAARNIAADAVTMALQQEIKPHDVGKVPYKLDIFDEHVFQMAWAMLNDVYRSEIALLYPPYLIALASVCLALVVQEEAFQKLQMGQISLDIAAATAMGATTATTPRDATVFSSLASSSSAPISVERVRKLEREGRGIVEEAELKRLAEAAGQTGWGPKGGAGAPSGSAGASRVSPSEEAIRRGATTSPAATRSGAPGPRPSGVGSMSRPFSPAAASPMGDHPTPAGAAAATGVSSSSSSATTRRPFHPGLPPRPPHLPPRPDSLLRSTSASGASSVHTLQNRAQPPVEGLGIGGGAGGYGGGGPGTVRTPGYAHSPGLMTPPAPLPAHASSHLRTSILAPASTSTSSTSSGRAPAQSPPPPPHNPLGLPTDPPPHPVVLFLSSLNVGIPTLAEIVQEMVSGYEVWHACKALVDDGRGMLALLEGMREKRRAVLLTAKRARMAGG
Length702
PositionKinase
OrganismTilletia controversa (dwarf bunt fungus)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Ustilaginomycotina> Exobasidiomycetes> Tilletiales> Tilletiaceae> Tilletia.
Aromaticity0.06
Grand average of hydropathy-0.182
Instability index54.76
Isoelectric point7.14
Molecular weight73610.39
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
cyclin-dependent protein serine/threonine kinase regulator activity	GO:0016538	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07611
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     146.16|      34|      35|     466|     499|       1
---------------------------------------------------------------------------
  466-  499 (62.39/20.67)	RP...FSPAAASPMGDH..PTPAGAA..........AATGVSSSSSS...AT
  502-  536 (49.40/14.97)	RP...FHPG.LPPRPPHlpPRPDSLL..........RSTSASGASSV...HT
  567-  614 (34.37/ 8.37)	TPgyaHSPGLMTP..PA..PLPAHASshlrtsilapASTSTSSTSSGrapAQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.13|      16|      19|     222|     239|       2
---------------------------------------------------------------------------
  231-  250 (17.67/11.03)	GSTLGGaGAsvGGMDGfGIR
  547-  562 (33.46/13.41)	GLGIGG.GA..GGYGG.GGP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     125.62|      32|      35|     397|     429|       3
---------------------------------------------------------------------------
  352-  376 (32.65/11.48)	........A...TAMGATTA.TTPRDATVFSSLASSS
  397-  429 (53.49/27.50)	EEAeLKRLA...EAAGQTGW.GPKGGAGAPSGSAGAS
  435-  465 (39.47/15.72)	EEA.IRRGAttsPAATRSGApGPR.....PSGVGSMS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.53|      13|      23|     184|     196|       4
---------------------------------------------------------------------------
  184-  196 (27.44/18.14)	QHHAGMGHLHGHG
  210-  222 (23.09/14.01)	QHLAGVNAAEEMG
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07611 with CycC domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) DSKKQQQQQQQHQHQQQQQHHAGMGHLHGHGLDPSDSPASD
2) LAEAAGQTGWGPKGGAGAPSGSAGASRVSPSEEAIRRGATTSPAATRSGAPGPRPSGVGSMSRPFSPAAASPMGDHPTPAGAAAATGVSSSSSSATTRRPFHPGLPPRPPHLPPRPDSLLRSTSASGASSVHTLQNRAQPPVEGLGIGGGAGGYGGGGPGTVRTPGYAHSPGLMTPPAPLPAHASSHLRTSILAPASTSTSSTSSGRAPAQSPPPPPHNPLGLPTDPPP
166
404
206
632










Molecular Recognition Features






MoRF SequenceStartStop




NANANA