<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07609

Description Uncharacterized protein
SequenceMSRAPDSRQRSQWQGRSGIGSTASGPSSPALGPLQRATEPSTAAGSTSDDGTPKLPQAYALEPPSFRPYLHPYAAGLGTPDFYPATSDLPEFTLSPQVMREGLQSKSQIGSEAFSIHNMIYERLSTPGVLSTLTALLHNVVHLRLPSHGCPPSAAASGVSLHSFRLPNRVTLNDLKLGNYIRQLADPSVPLHRLARSVPHGSKGERLLDMLWLGAPPPAQQNSAYSAMGAHGLRIPGAASASNLGAGAASSTAPVTIPASVPIERAVWFIRVVGASDIQSARNRSTNYTVEWTATVTAWLQKQLQELAVPPEAKAATLPTITRGQTLHSTSPITSSVPGALSSPITAAVTSPSSGPSSPVQTRGFGQASFGRSSLWHANSGLASADSAAAITAASLGRSTRVLMQPALLPRWISKWTYGLALLRALLAQQLLDTRTLFTWLAESFKSADITQSAVLLFLVEEALEDMLRSGPPLRAGLPILKHEAKTWWPQLANGLCDRLQTFVKQLAALESSSDEISDFFSTIGLREQKDDDPVSDIYRFTCTGIRDIIVLAFDLQPSLFLHPGSWANHATVLSQIILAEDPNEQRRPGIGRLSKNHLQQRRADFAILQGKCDRLLNGPTFDGVVPAEAHTAFYLREVLRSLDTCSSGSADYDKIFLQVFGFRKQGRDFAAEDLYPCVKLLLTWACRTDAEHLDSLQAAAFAHNDPFEHCSVDSHRPFVAIRLLAQLAGVDATESNLESRAGGRSSKTTYVSAADIHLLLMRWLSEVDESQRSAPHADLGTRHPSSKAAPARSDSSNLGVSLLFVHFERILTIFTELEMLGIFSFSKYIQRMTARGLILRQVPGTQYQIQPSSKQNSAKHSDNSLFGRLLRSLPIHHATAAQLKTRRLAIYGPRDTESREEAMERRASRELRSSFGWLFEPRTVGQDQARRSGSVMDSTEVVESLNDMELPPVASDSQQEPRLKSDDEADEMEALFSDDAESEYDVDRRLLRELVSPRLERHAVSEPAFASAEQLMELAKLFLVTADFANLARVVELGLRSADSVDAMRVACDLLVVHISVWRAIGVLEQLLNTVQAASRRISELDFTALFMLSASLDVSSAVDARASITTRATSAFVLTQSAWACVRLGALDPSRFAEAFQHTPFLDASAEDRSAAVSWKSHFDDLFQTQAGKTTEASTTLTHPMDDRDEREAARFLLIGALRHMRTASVQNATLIVEHLTQCCRSHMMTLDEQATNQGQQLWSTGDVEDASDWPALGQGRVSFRAHQKFIEELVGNGCVSAEVALKSMLLPHLKSFARGANLTEDIVGRTALATALSFLQVALLPSSAAAQSLTSIASSRMAAERTLLLQPRCVPLLARTFVSLQLGGKRAARPDISDSGSKFSRACASLAAALQADPQFRSAVAKVHSAFIAVCREEMDGIDASDRSLILLDVATLVGTFDIDPHKDDPGLSQKCLQAFDALTALRSVAELALAVESASSQGSATWKTLPMLQSIALLSYPNICLRWSGELAEHAFTTANSSSLLSTLLEAALLRIKSQWSGLPDQASHLLAGARSIGQLLRRSIPFTVPVHCGPITDALVPLIEQRLLQLNQNLGSDEGVERRTDLMATLALLRQIIRTSSFWTPLARQKGPQLLKTLINLAVDVAIDDVLLEDTLGSIDLLISELPSDAQTKAAVNSVLSGTSDSSGRSKEQDVFPNLPLPSSVENRIYQRLPILNSDLIGEGLLFGSTASSASVHHRFSIQPNKVWDHLEFIPQPEGGRAGTTSATTPRLDAKAISDSTNAASLAKIEAITGPSLVWLNNAGSLSLGDFGAKRTKDLITVPADSAGASSELSGFRTSARVLPEACPVAERTYGDGVGGEPIIARDLQSGAVNPSVEKRARSSMILRIPHLSFPDDELRDDSQLSSSGDEDHGEEEETASQARSRNSSARSSLAEREGGSRVGGSLLASSRKRKRQGEGGRGDTDGEAASSGLSDAPTPAGDEAPASSPMSDDTPTQHLPGRSASGGPRRGRSVRGRLSRGRN
Length2029
PositionKinase
OrganismTilletia controversa (dwarf bunt fungus)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Ustilaginomycotina> Exobasidiomycetes> Tilletiales> Tilletiaceae> Tilletia.
Aromaticity0.06
Grand average of hydropathy-0.192
Instability index51.69
Isoelectric point6.18
Molecular weight218846.21
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07609
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     112.94|      25|      39|     322|     360|       1
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  242-  262 (29.99/ 6.11)	SNLGAGAASSTAPVTIPASVP....
  336-  360 (45.77/27.37)	SVPGALSSPITAAVTSPSSGPSSPV
  378-  402 (37.17/ 7.85)	ANSGLASADSAAAITAASLGRSTRV
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     139.67|      36|      39|     132|     169|       2
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  116-  135 (21.42/ 7.02)	..IHNMIYERLSTPGV...................lsTLTA
  136-  174 (53.08/39.49)	L.LHNVVHLRLPSHGCPPSAAASGVSlHSFRlPNR.vTLND
  175-  206 (39.53/20.76)	LkLGNYIR.QLADPSVPLHRLARSVP.HGSK.GER......
  991- 1013 (25.64/ 9.62)	L.LRELVSPRLERHAVSEPAFASA.................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      76.52|      25|      38|     724|     748|       3
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  724-  748 (40.88/24.97)	LLAQLAGVDATE.SNLESRAGGR..SSK
  761-  788 (35.63/20.62)	LMRWLSEVDESQrSAPHADLGTRhpSSK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     100.32|      35|      39|    1466|    1502|       4
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 1466- 1502 (48.06/30.85)	LtALRSVAELA..............LAVESASSQGSATWKTLPMlQSIALL
 1507- 1555 (52.26/25.87)	I.CLRWSGELAehafttansssllsTLLEAALLRIKSQWSGLPD.QASHLL
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      36.57|      10|      39|     921|     930|       5
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  921-  930 (18.69/11.39)	EPRTVGQDQA
  961-  970 (17.88/10.53)	EPRLKSDDEA
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.21|      24|      72|    1558|    1584|       6
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 1558- 1631 (17.50/17.74)	ARSIG.QLLRRSIPFTVPVhcgPITDAL
 1632- 1656 (35.71/22.11)	ARQKGpQLLKTLINLAVDV...AIDDVL
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.84|      16|      21|      24|      40|       7
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   24-   40 (25.59/17.82)	SGPSSPALgPLQRATEP
   48-   63 (30.25/16.21)	SDDGTPKL.PQAYALEP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.54|      12|      21|     517|     528|       8
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  517-  528 (21.53/13.66)	ISDF..FSTIGLRE
  535-  548 (18.01/10.04)	VSDIyrFTCTGIRD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.76|      14|      21|     403|     416|       9
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  403-  416 (27.98/16.72)	LMQPALLPRWISKW
  427-  440 (24.78/13.88)	LAQQLLDTRTLFTW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     115.24|      29|      70|    1362|    1390|      10
---------------------------------------------------------------------------
 1362- 1390 (48.84/29.30)	RTFVSL..Q...LGGKRAARPDISDSGSKFSRAC
 1392- 1418 (27.13/12.57)	....SLaaA...LQADPQFRSAVAKVHSAFIAVC
 1430- 1459 (39.27/21.92)	RSLILL..DvatLVGTFDIDPHKDDPG..LSQKC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.30|      14|      31|    1265|    1278|      11
---------------------------------------------------------------------------
 1265- 1278 (24.59/17.93)	SFRAHQKFIEELVG
 1298- 1311 (23.72/16.98)	SFARGANLTEDIVG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     116.61|      38|      43|     831|     873|      12
---------------------------------------------------------------------------
  831-  873 (53.57/49.26)	QRMTARGLILRQVpgTQYQIQPSSKQNSAKHSDNSlfgRLLRS
  877-  914 (63.05/40.38)	HHATAAQLKTRRL..AIYGPRDTESREEAMERRAS...RELRS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     185.97|      60|    1139|     555|     719|      16
---------------------------------------------------------------------------
  585-  651 (86.94/127.91)	EQRRPGIGRlsKNHLQQRradFAILQGKCDR...LLNGPtFDGVVPAEAhTAFYLREVLRSLDTCSSGSA
 1153- 1215 (99.03/65.08)	EDRSAAVSW..KSHFDDL...FQTQAGKTTEastTLTHP.MDDRDEREA.ARFLLIGALRHMRTASVQNA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     369.50|     124|     140|    1730|    1867|      19
---------------------------------------------------------------------------
 1730- 1867 (186.65/116.14)	LLFGSTASSASVHHRFSI...QPnkvwdHLEFiPQPEgGRAGTTSATTPRLD........AKAISDSTNA.ASLAKIEaitGPSLVwlnnAGSLSLGDFGAKRTKDLITVPADSAGASSELSGFRTSA.RVLPEACPVAERT.....YGDGVGGEP
 1873- 2014 (182.85/86.30)	LQSGAVNPSVEKRARSSMilrIP.....HLSF.PDDE.LRDDSQLSSSGDEDhgeeeetaSQARSRNSSArSSLAERE...GGSRV....GGSLLASSRKRKRQGEGGRGDTDGEAASSGLSDAPTPAgDEAPASSPMSDDTptqhlPGRSASGGP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      84.95|      25|     438|     685|     712|      20
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  685-  712 (43.01/33.77)	WAC.RTDAehLD.SLQAAAFAHNdPFEHCS
 1125- 1151 (41.93/22.20)	WACvRLGA..LDpSRFAEAFQHT.PFLDAS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.29|      12|      15|    1024|    1035|      22
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 1024- 1035 (19.38/12.14)	LVTADFANLARV
 1040- 1051 (19.91/12.70)	LRSADSVDAMRV
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07609 with Med12 domain of Kingdom Fungi
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