<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07601

Description Uncharacterized protein
SequenceMAADYWRSSQCHNWQFTHEQLALARLEDARFASPLELSAIGIWIGNTVSELCKRLVLRQRVTATATVFARRFYAKNSYSATDPCLVCASCVYVAAKVEEMPIHVKQVVTEAMRLFAETSAGKFSFPSDRAILAEMEFYLIEDLQFDLIIHHPYRALVSIYDAVCNDSKTADAVAMALQQEIKPQDVGKVPYKLDIFDEHVFQMAWAMLNDVYRTDITLLYPPYLIALATVCLALVVQEEAFQKLQMGQISLDIATATGIGTAVTTPRERGEMMGFGGEGGCAGAAMAVSAPISVERVRRLERVGREIVEDAEVRRMGGGGMTSRVSPSDEAIRRGVTTSPAATRGPAGSGNPPSRASGVGIGIGSLSRPFSPVASSPMGGGGGIDHPTPAGSSSTRRPLHPTLPPRPPHPTPRPDSLLRSTSSSGGSSLNNLQNRAQPPYSSAGGGQDGYSGPGTVRTPGFGHSPALMTPPPLLPTHAHTSSHLRTSILAPTATTTASSSSSASSTNPSHAPHQPNNPLANPLGLPTDPPPHPLILFLASLNMSIPTLAEIVQELARSFLAASSSSSGILTSFRDDTSRPVLFIES
Length586
PositionKinase
OrganismTilletia walkeri
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Ustilaginomycotina> Exobasidiomycetes> Tilletiales> Tilletiaceae> Tilletia.
Aromaticity0.06
Grand average of hydropathy-0.119
Instability index55.19
Isoelectric point6.77
Molecular weight62403.12
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
cyclin-dependent protein serine/threonine kinase regulator activity	GO:0016538	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07601
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     296.07|      60|      62|     370|     429|       1
---------------------------------------------------------------------------
  316-  363 (62.77/23.91)	........MGGGGMTSRV....SPSD.EAI..........RRGV.TTS..PAatRGPAGS.GNPP...........................SRASGVGIGI
  370-  429 (117.49/51.16)	FSPVASSPMGGGGGIDHP....TPAGSSST..........RRPLHPTL..PP..RPPHPT.PRPD.......................SLLRSTSSSGGSSL
  436-  488 (70.53/27.78)	AQPPYSSAGGGQDGYSGPgtvrTPGFGHS................PALmtPP...PLLPThAHTS.......................SHLRT.......SI
  489-  568 (45.27/15.20)	LAPTAT................TTASSSSSasstnpshapHQPNNPLA..NPlgLPTDPP.PHPLilflaslnmsiptlaeivqelarSFLAASSSSSG...
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      96.32|      33|      67|     128|     164|       3
---------------------------------------------------------------------------
  128-  164 (44.83/53.73)	DRAILaEMEFYLIEDL.QFDL.IIHHPYraLVSIyDAVC
  197-  231 (51.48/40.24)	DEHVF.QMAWAMLNDVyRTDItLLYPPY..LIAL.ATVC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     122.04|      38|      46|      39|      78|       5
---------------------------------------------------------------------------
   39-   78 (58.46/47.97)	AIGIWIGNTVSELckRLVLRQRVTATATVFARRFYAKNSY
   88-  125 (63.58/44.38)	ASCVYVAAKVEEM..PIHVKQVVTEAMRLFAETSAGKFSF
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07601 with CycC domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) VGREIVEDAEVRRMGGGGMTSRVSPSDEAIRRGVTTSPAATRGPAGSGNPPSRASGVGIGIGSLSRPFSPVASSPMGGGGGIDHPTPAGSSSTRRPLHPTLPPRPPHPTPRPDSLLRSTSSSGGSSLNNLQNRAQPPYSSAGGGQDGYSGPGTVRTPGFGHSPALMTPPPLLPTHAHTSSHLRTSILAPTATTTASSSSSASSTNPSHAPHQPNNPLANPLGLPTD
303
528










Molecular Recognition Features






MoRF SequenceStartStop




NANANA