<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07596

Description Uncharacterized protein
SequenceMESAATGANQQLHLALEVAALPQPADSDKDPFAPRPRLDDILPQELGGAIYASAEQLYPSLAHRLHRLWHERGDFSKFKRSALNLDDNQTPPPEPPHFGITSPASASPSSPADAQEGQGQLQQEQRNAVAISVQDAESIKASMLQRIGNAHFATYFLHNLVALLLQYQTAQRKLQLEQQSAIAQSQVQILSGTNKQQQPQQNSITSTPEPAANTPQQHQEPYFDPKILALSEVFPDPSLPHNQHQNASHSLIDDDDDDDDEQKDDTKAQQEQQQEQQPQASTSEPSIPIDQTSFPALATTRATLTRASSILRSGASSIRRVAGSSSSTASSEQTRWAGLAALQTSSSASWKLAPAPQNVGVGSAVWWGGLSDREDGEGAGAKDAWVGYGLPEVQPRFRRNAMAYFADEDLQPPSSTTSSTTPRPAGSSSEPLVFLHRPGRRLRLTLISPEGVEHNSDSTARQKSTGDEMMESDEGGGPSRSGTSAPAVENVLREAQEELLDEELWSNLLAQVQNTSAVVIRTSSALQVSGKPAQSSAAGTSAALSSATTPASTPAPQLAAEALAPVMESQSEGGTKKEKKKRRRLDAASSETERIEVRLGGGWKLVLHMGRAESIASASSETTGDFAHTSPSSALPRILLAYFRLSVLRSIRLRLRARNESSTKANNSKSASSASAASGSQVKNSDKGKSQAQLEREAAAASSKRGVGAYEVVSGSKLKQQQLQAAPSSTTAVGDAGKEKEKALGLGTKKESYLDPVLGLFRYATFVADVELILDDLSRRGLDGVDDEKHSPSSGKRGRRIWYRLSPLASLVDTSAWLRTFLDEGQSTSAQQASTSGLAAPGTTTQHHQQMDAVRMLSGMGTVFCDDSPLVLINFGYPARLSVQFARREMLPRWTGELSLDVFKKFLEREIGEAKAQ
Length917
PositionHead
OrganismTilletia walkeri
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Ustilaginomycotina> Exobasidiomycetes> Tilletiales> Tilletiaceae> Tilletia.
Aromaticity0.05
Grand average of hydropathy-0.581
Instability index59.81
Isoelectric point5.87
Molecular weight98582.95
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07596
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      82.81|      26|      27|     567|     592|       1
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  578-  607 (29.24/10.79)	EKKKRRRLDAASSET.erIEVRLG.....G.GWKlvL
  666-  690 (30.83/11.73)	NNSKSASSASAASGS...QVKNSD.....K.G.K..S
  716-  750 (22.74/ 6.93)	SKLKQQQLQAAPSSTtavGDAGKEkekalGlGTK..K
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     569.82|     150|     212|     197|     354|       2
---------------------------------------------------------------------------
   22-  192 (130.98/47.33)	...........PQPADSDKDP.....FAPRP.RLDDILPQelggaiyasaeqlyPSLAHRLHR.....LWHERGDFSKFKRSALNlddnqtpppepphfgitspasaspsspadAQEGQGQLQQEQRN.AVAISVQ..DAESIKAS.............MLQRignahfATyfLHNLVALLL.QYQTAQRKLQLEQQSAIAQSQVQiLSG................
  197-  354 (241.07/104.55)	QQPQQNSITSTPEPAANTPQQHQEPYFDPKILALSEVFPD..............PSLPHNQHQnashsLIDDDDDDDDEQKDDTK.............................AQQEQQQEQQPQAS.TSEPSIP.IDQTSFPAL.............ATTR......AT..LTRASSILR.SGASSIRRVAGSSSSTASSEQTR.WAGLAALQTSSSAswkLAP
  411-  565 (197.77/75.38)	QPPSSTTSSTTPRPAGSSSEPLVFLHRPGRRLRLTLISPE...............GVEHNS.............DSTARQKSTGD.............................EMMESDEGGGPSRSgTSAPAVEnVLREAQEELldeelwsnllaqvQNTS......AV..VIRTSSALQvSGKPAQSSAAGTSAAL.SSATTP..ASTPAPQLAAEA...LAP
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      84.21|      25|     159|     625|     651|       3
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  625-  651 (36.39/31.79)	DFAHtSPSSAlPRILLAYFRLSVLRSI
  787-  811 (47.82/31.30)	DEKH.SPSSG.KRGRRIWYRLSPLASL
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      40.96|      10|      15|     360|     369|       4
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  360-  369 (21.61/12.20)	GVGSAVWWGG
  378-  387 (19.35/10.18)	GAGAKDAWVG
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07596 with Med17 domain of Kingdom Fungi
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