<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07580
Description |
Mediator of RNA polymerase II transcription subunit 10 |
Sequence | MAALSPDVAIIDVEAQLKDIVQNLYNLIVQAYDHHGSKTQEAMKREIQSLIQNLVKLARTAPSVNINIPPEVMSYVENSRNPDIFTREFVETVQRMNQMLYGRVDAYRALQEQLALHVSSAIPELKDDVNSVVESTGGKVVV |
Length | 142 |
Position | Middle |
Organism | Alternaria alternata (Alternaria rot fungus) (Torula alternata) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Dothideomycetes>
Pleosporomycetidae> Pleosporales> Pleosporineae> Pleosporaceae> Alternaria>
Alternaria sect. Alternaria> Alternaria alternata complex.
|
Aromaticity | 0.05 |
Grand average of hydropathy | -0.143 |
Instability index | 38.98 |
Isoelectric point | 5.13 |
Molecular weight | 15891.96 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364146
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP07580
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 136.35| 44| 73| 6| 54| 1
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6- 54 (61.56/57.74) PDVAIIDVEAQLKDIVQNLYNLiVQAYdhhgSKTQEAMKREIQSLIQNL
82- 125 (74.79/51.85) PDIFTREFVETVQRMNQMLYGR.VDAY....RALQEQLALHVSSAIPEL
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