<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07527

Description Uncharacterized protein
SequenceMAGRHQAPYNRYTNAGNSYGNNTLGANNNMNSLNIPFPPQNSGSMGIMGGGNGNSNNLNSGNVSGSYSSAAASSFSTTPTNTTSPYSTTSSPGYHSPNVSKTHPHPPLKKYVFQPPLKLLPYSKSIPALGFPGMFPQRPNQEEDIMSESNVRNGFVDKPVVSNEQTCAHDIIFGKLQDDQRLLNEMGNFMVDVLRRKRKASSITGPSSFKPPTRTALMESKKEQWIQELANGAVPLQKLSRNVPHGYKGEKLLETLAARQVPYLRATWYIKVVGLSEMAQRNASNAGSSTSHAYNWTMIVIAHLKKQLVDLVPLMANNAGGSMRGYRNSNVPGAGGNNDNQVKPWATPETRARFEARWAYSTKLTRWQYSEGLLDQRNFLKWSLDTLGTSGSFEIMWLVLTGLVQDYIDEYRRNRTLTKLLIETLIKAYSAVLQCSKAQTPDITAPLGPGSSNVFAGLKRDIERLIQSLFLSSPDMFVIPKLYHQYRQVFEVILGEQARPKLLKTQPDICHVMDAYWTMTKSRNEVFCGTLEENRIGSTGGNSNSNSNGNNSNSNNNNNSNTNLADSTTSKSGATPVTNTPSDLANQDSSKSSIKGTTSTSDRPGVDEEHIIHTLDTIGRYADSGYLLLENSSSDTGGWTNVKGHSAIMASLTIFGGCTSGSTGAVQTGLVSQVIRILCRWATSEARHGDWRAFLISSILLSWRSQDPALYPKRCDALQEALMGFLDDQIFTEPSSMATDCEANQMAASASTSSSTLGTEGSDDPTANRQSTIPISFLYDTFIRMQLFSYHRYLNRLTARGHLERSQRNRSDVARCLYHLKSLPLLHPAPAHLINQRRVALYGTRRGANDESRLELDAIRKLQRLAKLWMIGSNPSGVVVSTVTDGDGGGGDDDNDAPLFGPNAEDMTEPMANDTIETFEFALSDKLEQQMQHLMAESTRYVIIQFTSEWLMGEVKKFVVKSVQIGEDNWRVMTSPGSCLLNARQYVALIKILDCAKDYMNIVNLALWVLEKTNERSVLALVIDTLRQYANIWKLMNMGNTAAKTLWKKHQALQSHGIRERCVMMYMVQLVQEGYSISDDMRLQLQKDLQTRPKVRGRHTAVSIVDELLQVVNSNASKASIQNVVEALCTSYQYQNAALWIGSVLDGAVDIIQQWIKKTTMYGSSGTITGDQKLQQVTLQRFLCAFADVIKDIVDLCTLTGQVNDAIVDWLSNKMSVVEEMRQPQSWMPLFIVLLVSRNLVSLDVIFYRFTLPWFDQISQHFLQDDMLWSSTANPATSANGASTNDGSGGNAANSDSSKEWLHICENMMILIRLLVVQERCCWIQQDEEAMDDASGVYQQPWALRAEEIFRLDTLRYTQLACSLDRIEPMFALMEKLVLIASSLPLSSPLLQELVMLRADLLQIGWFRQACVRDLHGVYQRFSSHGAEASNEKKIKKKMLSIVDELIGGTLVDMGSGHHHHHHHPHHHLHHAALVQEPDFIDKIKRIFTNVSQWNEEQCRVQVSLLLDNILLSDGQNPNNPHILGGGDVTMMNSNDKPDHDVDGDNLSVMNKNNSNVDLDAFVRFFFSVVLSSDDHQQRRSIFFKNIIHGLRERVLLELLNYGVRLLEGCDIEINEVGSQQDHHSSSASPQQSQQQQQQEDQSDQNLTSSATSSSAASSSALSTSIISTFGQQQRISATSTPSPAHSSSMTSFPSNVLLLSSIEEPFDSAKYTYKSQAFFNIMQYMMAQNRWGNDKKINLVKILYRQIKRFQSGLLAYQVMQDAHTTFTKALVALDMTKNNVSSAVALLNTEGLPSEPAGTPITLEDLRTSLLIRIRLVVPFASLIWEYPSDDECDALSWIRTLITLLGNPIVHGNGSQERFFEFVLDFVSLIIDEIPQKLRKLTLNLLSTLHGELTTVPAIFQSRVNRILPFSTHNIYLTNSRLATGILGATPTADPLQQQQHLETCMDQSRPWEWLEDYVSDPPHDNDAPINLGLFRARKSKKLDGTYIRCRT
Length1995
PositionKinase
OrganismAbsidia glauca (Pin mould)
KingdomFungi
LineageEukaryota> Fungi> Fungi incertae sedis> Mucoromycota> Mucoromycotina> Mucoromycetes> Mucorales> Cunninghamellaceae> Absidia.
Aromaticity0.08
Grand average of hydropathy-0.341
Instability index42.40
Isoelectric point6.46
Molecular weight222495.16
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07527
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     163.86|      43|      95|      24|      70|       1
---------------------------------------------------------------------------
   26-   68 (80.62/46.92)	ANNNMNSLNI.PFPPQNSGSMGIMGGGNGNSNNLNS.GNVSGSYS
  537-  554 (24.36/ 7.42)	..................GST....GGNSNSN..SN.GN..NSNS
  555-  599 (58.87/28.64)	NNNNNSNTNLaDSTTSKSGATPVTNTPSDLANQDSSkSSIKGTTS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      37.45|      10|     368|     383|     392|       2
---------------------------------------------------------------------------
  383-  392 (18.77/12.07)	SLDTLGTSGS
  753-  762 (18.68/11.96)	SSSTLGTEGS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     167.38|      52|     368|    1026|    1079|       3
---------------------------------------------------------------------------
 1026- 1079 (88.06/87.64)	LRqyANIWKLMNMGNTAAKTLWKKHQALQSHGIR...ERCVMMYMVQLVQE..GYSISD
 1397- 1453 (79.32/69.58)	LR..ADLLQIGWFRQACVRDLHGVYQRFSSHGAEasnEKKIKKKMLSIVDEliGGTLVD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     206.97|      64|     509|    1266|    1335|       8
---------------------------------------------------------------------------
 1266- 1335 (102.41/67.91)	DMlwssTANPATSANGASTNDGSGGNAANSDSSKEWLHicENMMILIRLLVVQERCCWIQQDEEAMDDAS
 1776- 1839 (104.56/55.13)	DM....TKNNVSSAVALLNTEGLPSEPAGTPITLEDLR..TSLLIRIRLVVPFASLIWEYPSDDECDALS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      67.97|      19|     509|     653|     682|       9
---------------------------------------------------------------------------
  653-  672 (30.13/14.60)	TIFGgCTSGS.TGAVQTGLVS
 1160- 1178 (27.04/ 7.03)	TMYG..SSGTiTGDQKLQQVT
 1197- 1208 (10.80/ 8.93)	.....CT..L.TGQVNDAIV.
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07527 with Med12 domain of Kingdom Fungi
Unable to open file!