<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07501
Description |
Mediator of RNA polymerase II transcription subunit 6 |
Sequence | MDSKNEPPLDEIQWRSPLLIQQMGGLHSNTILFYFAESPFFERTSNNAVIMSQAMNNMSMYHFIQTREAFEGRLKTMSGLEFIVGEEPAESGPGMGTGVWVIRKQTRRKRYQEEDEITVHASYFVVNENIYMAPTLADILASRIMTISSAIAKALPAAEAARQWRPSGGHSYKPPPAPTSGPAGALQAARNRMHEPKEGTPAPGAPTTANKGAAAAAPPNVQELSLERSAEESFWVHMRHGGEYLDENPITGRPGEFHLSSTGRKPAVAPQVANKAPTGISAMTGPPRLNTKVDDNKKESKTEKTPRSAMPKPKRKKSKLGGSGTRTPTAA |
Length | 331 |
Position | Head |
Organism | Cordyceps confragosa RCEF 1005 |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes>
Hypocreomycetidae> Hypocreales> Cordycipitaceae> Akanthomyces>
Cordyceps confragosa.
|
Aromaticity | 0.06 |
Grand average of hydropathy | -0.631 |
Instability index | 58.71 |
Isoelectric point | 9.54 |
Molecular weight | 36032.43 |
Publications | PubMed=27071652
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364143
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP07501
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 94.64| 27| 69| 133| 184| 1
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155- 184 (44.12/45.60) LPAAEaARQWRPSGGhsYKPPPAPTSGPAG
186- 212 (50.51/14.03) LQAAR.NRMHEPKEG..TPAPGAPTTANKG
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