<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07474
Description |
Mediator of RNA polymerase II transcription subunit 4 |
Sequence | MDKYIDARFDRVEKALTTLIDSIAKYNPSTALAEDLLAADKELSQGLETLQTHQNNHLRILALRADVTALDAQIKSALLALAGSRRDILTTPATVFPEDSPNRYVRRQTHNYEFRYDQLMSYARRISRNTVPAPGQTDGAAFFGPFDGGEGAGGPAEAAATVGTSAATPAATPGPLNGVGTPSAAAAGGAQNPSQMELDTPVAAAGGAGSKAVGGGGSGGNTTAGTSAGTPGPLSGMAPPANVPDVLPADYQQYIAPAAGTVFFPWPMPDLMRTGALRSLQAVTDSQSEKLGGAASPSFSIRFVSLEEQQEEERQRAAREAEEREAWEERQRQMAEEAAAAGGFGGSQPTMAGAARPGGPAAAAAPAQFASTLDMDDD |
Length | 378 |
Position | Middle |
Organism | Sporothrix insectorum RCEF 264 |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes>
Sordariomycetidae> Ophiostomatales> Ophiostomataceae> Sporothrix.
|
Aromaticity | 0.06 |
Grand average of hydropathy | -0.367 |
Instability index | 53.60 |
Isoelectric point | 4.73 |
Molecular weight | 39032.66 |
Publications | PubMed=27071652
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364141
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP07474
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 33.30| 10| 15| 312| 321| 1
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312- 321 (18.52/11.55) EERQR.AAREA
328- 338 (14.77/ 7.81) EERQRqMAEEA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 81.10| 17| 17| 173| 189| 2
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173- 189 (34.25/14.32) PGPLNGVGTPSA.............AAAGG
193- 207 (24.59/ 8.09) PSQME.LDTP.V.............AAAGG
231- 260 (22.26/ 6.59) PGPLSGMAPPANvpdvlpadyqqyiAPAAG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 60.29| 16| 18| 96| 111| 3
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96- 111 (31.35/22.72) FPEDSPNRYVRRQTHN
114- 129 (28.94/20.43) FRYDQLMSYARRISRN
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 45.32| 12| 18| 133| 144| 4
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133- 144 (22.51/ 9.03) APGQTDGAAFFG
152- 163 (22.81/ 9.24) AGGPAEAAATVG
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