<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07441

Description Uncharacterized protein
SequenceMPAPLSAFSGAPPVAEQGGRGHLEVAARLVPSLPTICTRPQQSHLDSPLAQNINAMTTPPHESTSHLFDNQNAPMSSLESHLHALESALDDLNSARRVPPSLRLGITNATSDLNGWEYSIQRLTGSIIDLGKQDALGTASELVEQGVEPIDRNTAHRAILHSRQDNILPPVPHSQVTIPFTTEDKLLPTDWTSDHEAPYTLRDLKLLVRSYNNPNGGVRIRFWAPARSKSSTSTRPAALHVLVDKVIQAFILLDHSSTVDSAGITVDRVSCFAPHEAKPPSGNSTYNVYQSITRYFSVLLSTEPELTPRNILDILLTYRTLFRDKCGFCGTELSADGRVPPVGRIWKRREGTTDGSDAGAWTPRHVQCMSAFY
Length373
PositionTail
OrganismCalocera viscosa (strain TUFC12733)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Agaricomycotina> Dacrymycetes> Dacrymycetales> Dacrymycetaceae> Calocera.
Aromaticity0.06
Grand average of hydropathy-0.343
Instability index53.99
Isoelectric point6.39
Molecular weight40875.51
Publications
PubMed=26659563

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07441
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.63|      16|      37|      45|      60|       1
---------------------------------------------------------------------------
   45-   60 (29.23/22.23)	LDSPLAQNINAMTTPP
   85-  100 (27.40/20.32)	LESALDDLNSARRVPP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.89|      15|      38|     144|     158|       2
---------------------------------------------------------------------------
  144-  158 (26.39/16.19)	EQGVEPIDRNTAHRA
  183-  197 (27.50/17.16)	EDKLLPTDWTSDHEA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      81.55|      24|      46|     206|     229|       3
---------------------------------------------------------------------------
  206-  229 (44.36/25.98)	LLVRSYNNPNGGV...RIRFWAPARSK
  252-  278 (37.19/20.77)	LLDHSSTVDSAGItvdRVSCFAPHEAK
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07441 with Med27 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ICTRPQQSHLDSPLAQNINAMTTPPHESTSHLFDNQNAPMSSLESHLHALE
36
86










Molecular Recognition Features






MoRF SequenceStartStop




1) GRIWKRRE
2) VRIRFWA
343
218
350
224