<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07439

Description Transcription factor Iwr1
SequenceMSLPPNVIRVKRKRVEESPVTFLQIDQGAKRHRSDSSHWVYQRLGATAQQQQRRRQQQQQQQQQQQQQQQQQQQQQQPKPQIQLSTAKDDAGDAGTQNAAPQQQTQDPGKLAPAVASEPRRFRVSKAMLAAAAASGGAAGAVSKGDRYGTPTLFVERSRRKKLAPKPRRSMMSLQSPDGDAAAAKDVDVKAFKRPGVAKRARKAAKTTAASTDGDAAKPTTSSTTTAAAAANPLPPSLTDRAAEDMRKITADMNEWVMREMGANLHSMEEERKRAAAAAAAPPASPSRFRPKAPAQRYHERHPEVPAPGSPAATTATDVEGDTNMTDASEEEDGDEDDWVIEEYVRIPANSVALDVAPSDVGFLVLDGEEESLLFFGPQNDEDEDWDEDEEDENAENHYTADYPEDEVDSEDEFNRNAYYFRNMNASDDEEYDQGDFDEDGDARSADGGGENDDARMTRILEQMKRLKALQR
Length472
PositionTail
OrganismBeauveria brongniartii RCEF 3172
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes> Hypocreomycetidae> Hypocreales> Cordycipitaceae> Beauveria> Beauveria brongniartii.
Aromaticity0.05
Grand average of hydropathy-1.078
Instability index70.21
Isoelectric point4.84
Molecular weight52084.15
Publications
PubMed=27071652

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process
protein import into nucleus	GO:0006606	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07439
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      74.62|      15|      15|      49|      63|       1
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   49-   63 (27.32/12.55)	QQQQRRRQQQQQQQQ
   65-   79 (28.46/13.38)	QQQQQQQQQQQQQPK
   80-   94 (18.85/ 6.49)	PQIQLSTAKDDAGDA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     125.38|      37|      44|     358|     401|       2
---------------------------------------------------------------------------
  321-  345 (25.21/ 6.42)	.......................GDTNmtDASEEEDGDEDDWVIEEY..V
  358-  401 (57.46/36.90)	PSD.VgflvlDGEEE...SLLFFGPQN..DEDEDWDEDEEDENAENHytA
  404-  442 (42.71/16.17)	PEDeV.....DSEDEfnrNAYYFRNMN.aSDDEEYDQGDFDEDGD.....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     122.14|      28|      40|     113|     141|       3
---------------------------------------------------------------------------
  113-  130 (17.77/ 7.90)	.....................PAVASE..........PRRFR.vSKAMLA
  131-  173 (26.11/ 9.40)	AAAASGGAAGA.vskgdrygtPTLFVErsrrkklapkPRR......SMMS
  174-  208 (30.89/12.35)	LQSPDGDAAAAkdvdvkafkrPGVAKR..........ARK.....AAKTT
  209-  227 (23.43/ 7.75)	AASTDGDAAKP...............................ttSSTTTA
  275-  290 (23.93/ 7.81)	AAA....AAAA..........PP..AS..........PSRFR........
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.63|      14|      16|      14|      29|       4
---------------------------------------------------------------------------
   14-   29 (18.61/17.76)	RVEESPVTFLQIdqGA
   33-   46 (26.02/16.66)	RSDSSHWVYQRL..GA
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07439 with Med15 domain of Kingdom Fungi
Unable to open file!