<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07439

Description Transcription factor Iwr1
SequenceMSLPPNVIRVKRKRVEESPVTFLQIDQGAKRHRSDSSHWVYQRLGATAQQQQRRRQQQQQQQQQQQQQQQQQQQQQQPKPQIQLSTAKDDAGDAGTQNAAPQQQTQDPGKLAPAVASEPRRFRVSKAMLAAAAASGGAAGAVSKGDRYGTPTLFVERSRRKKLAPKPRRSMMSLQSPDGDAAAAKDVDVKAFKRPGVAKRARKAAKTTAASTDGDAAKPTTSSTTTAAAAANPLPPSLTDRAAEDMRKITADMNEWVMREMGANLHSMEEERKRAAAAAAAPPASPSRFRPKAPAQRYHERHPEVPAPGSPAATTATDVEGDTNMTDASEEEDGDEDDWVIEEYVRIPANSVALDVAPSDVGFLVLDGEEESLLFFGPQNDEDEDWDEDEEDENAENHYTADYPEDEVDSEDEFNRNAYYFRNMNASDDEEYDQGDFDEDGDARSADGGGENDDARMTRILEQMKRLKALQR
Length472
PositionTail
OrganismBeauveria brongniartii RCEF 3172
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes> Hypocreomycetidae> Hypocreales> Cordycipitaceae> Beauveria> Beauveria brongniartii.
Aromaticity0.05
Grand average of hydropathy-1.078
Instability index70.21
Isoelectric point4.84
Molecular weight52084.15
Publications
PubMed=27071652

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process
protein import into nucleus	GO:0006606	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07439
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      74.62|      15|      15|      49|      63|       1
---------------------------------------------------------------------------
   49-   63 (27.32/12.55)	QQQQRRRQQQQQQQQ
   65-   79 (28.46/13.38)	QQQQQQQQQQQQQPK
   80-   94 (18.85/ 6.49)	PQIQLSTAKDDAGDA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     125.38|      37|      44|     358|     401|       2
---------------------------------------------------------------------------
  321-  345 (25.21/ 6.42)	.......................GDTNmtDASEEEDGDEDDWVIEEY..V
  358-  401 (57.46/36.90)	PSD.VgflvlDGEEE...SLLFFGPQN..DEDEDWDEDEEDENAENHytA
  404-  442 (42.71/16.17)	PEDeV.....DSEDEfnrNAYYFRNMN.aSDDEEYDQGDFDEDGD.....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     122.14|      28|      40|     113|     141|       3
---------------------------------------------------------------------------
  113-  130 (17.77/ 7.90)	.....................PAVASE..........PRRFR.vSKAMLA
  131-  173 (26.11/ 9.40)	AAAASGGAAGA.vskgdrygtPTLFVErsrrkklapkPRR......SMMS
  174-  208 (30.89/12.35)	LQSPDGDAAAAkdvdvkafkrPGVAKR..........ARK.....AAKTT
  209-  227 (23.43/ 7.75)	AASTDGDAAKP...............................ttSSTTTA
  275-  290 (23.93/ 7.81)	AAA....AAAA..........PP..AS..........PSRFR........
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.63|      14|      16|      14|      29|       4
---------------------------------------------------------------------------
   14-   29 (18.61/17.76)	RVEESPVTFLQIdqGA
   33-   46 (26.02/16.66)	RSDSSHWVYQRL..GA
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07439 with Med15 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) DGEEESLLFFGPQNDEDEDWDEDEEDENAENHYTADYPEDEVDSEDEFNRNAYYFRNMNASDDEEYDQGDFDEDGDARSADGGGENDDARMTRILE
2) MSLPPNVIRVKRKRVEESPVTFLQIDQGAKRHRSDSSHWVYQRLGATAQQQQRRRQQQQQQQQQQQQQQQQQQQQQQPKPQIQLSTAKDDAGDAGTQNAAPQQQTQDPGKLAPAVASEPRRFRVSKAMLAAAAASGGAAGAVSKGDRYGTPTLFVERSRRKKLAPKPRRSMMSLQSPDGDAAAAKDVDVKAFKRPGVAKRARKAAKTTAASTDGDAAKPTTSSTTTAAAAANPLPPSLTDRAAEDMRKITADMNEWVMREMGANLHSMEEERKRAAAAAAAPPASPSRFRPKAPAQRYHERHPEVPAPGSPAATTATDVEGDTNMTDASEEEDGDEDDWVIEEY
367
1
462
344










Molecular Recognition Features






MoRF SequenceStartStop




1) DVDVKAFKRPGVAKRARKAAKTTAA
2) EESLLFFGPQ
3) HWVYQRLGA
4) KPQIQL
5) NAYYFRNM
6) NDDARMTRILEQMKRLKALQR
7) RRFRVSKAMLAAA
8) SRFRPKAPAQRYHERH
9) TLFVERSRRKKL
10) VIEEYVRI
11) YDQGDF
186
370
38
79
417
452
120
287
152
340
432
210
379
46
84
424
472
132
302
163
347
437