<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07393

Description PSP1 domain-containing protein
SequenceMSSGTGSASTAKPGPPSKQGQGAFSGVSNHALLLDKLNRRSTPDSEALASSDDEADSHRQEAPQQATQPQKPVRRASWLNDTTQPLPRPRKGSFASSSMSPTASHPSTPSAEGTAPWGTHSQSSGVMGRAPVSGGSFTWGTGIWNNERKDPPSRLSEVLPSPTSTMPPGSAGGSFFNTDGNYGQTSPAPRDSGPNAQIPFAIPLHPTPKTYRSQSYSVGQLEPDAPPAAMSGSTILGRGRAHGHSGLQHRPSRPSMLSEMSNDGGLLGKVKEVDDDDDESATESMQGSMHQSAEAKTIELLARENAMLRQQQQQQQQQQQQQQQQQQQQYQNRLRPRASTGAAYGLGNGYALRESVPEESDFAIDELDEANDGNEMAAKRALGRRMSEYGASGFRSPYENRKLENVKKAFWHSSLGFGGPEGQQSRRHSFADIPTRQGSISSINESFNALDTPVAEQQHPQDFSMGYSESQNYPLGNTAAYFTPGGGLAAPTQSMQFNNPFPSAYTMHPPYGNRAPSPHRNVYAISQPRHNQLLHIVLFKCARADVFYIQEGTGLTVKPGDLVIVEADRGTDLGTVARDNVDWQTAKELKEHYAEEQYKWLMMYSQNAAAAQDGTGAGLMAAANGLQGSAVGGMGPPNQHHMQEPNAGELKPKLIKRLAQSHEIHALRDKEGNEAKAKRVCMQKVKEHGLNMEILDAEFQMDWKKLTFYYFADSYINFNSLVTDLFKIYKTRIWMSAINPASFASPTLGIQAPSGVGPGAVGVGRGANNSERRSAQQQQQQQQDQQGGGFSGPGPAGRGFPNSFTPPFGGERPGGPAGGYGQPNYPYSHMGGMGSAPRPGNMPYVPGVVPSLDSYSFPGAADYQIRSRFPPGTEAGPHEPGGGPMNPQNDWHAAFQGLSLNSR
Length903
PositionTail
OrganismColletotrichum tofieldiae
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes> Hypocreomycetidae> Glomerellales> Glomerellaceae> Colletotrichum> Colletotrichum spaethianum species complex.
Aromaticity0.08
Grand average of hydropathy-0.797
Instability index57.76
Isoelectric point6.70
Molecular weight97292.13
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07393
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     364.95|     115|     463|     309|     430|       1
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  186-  257 (38.64/11.01)	SPAPRDSGPNaQI.PFAIplhptpktyrsqsysvgqlepDAPPAA.....MSGSTILGRGRA.HGHSGLQhRPSRPSML............................................................................................................................................................................................................................................................................................
  309-  348 (35.28/ 9.12)	..........................................................................................................................................................................................................................................................................semsndggllgkvkevdddddesatesmqgsmhqsaeaktiellarenamlRQQQQQQQQQQQQQQQQQQ......QQYQNRLRPRASTGAAYGLGN
  349-  486 (177.06/99.48)	GYALRESVPE.ES.DFAI.....................DELDEANDGNEMAAKRALGRRMSEYGASGFR.SPYENRKLENV..KKA....FW.HSSLGFGGPEGQ.......................................................................................................................................................................................qsrrhsfadiptrqgsissinesfnaldTPVAEQQHPQDFSMGYSES......QNY.....PLGNTAAYFTPGG
  487-  561 (82.62/35.68)	GLA....APT.QSmQFN......................NPFPSAYTMHPPYGNRAPSPHRNVYAIS....QPRHNQLLHIVlfKCAradvFYiQEGTGLTVKPGD.................................................................................................................................................................................................................................................................
  773-  818 (31.35/ 6.92)	..........................................................................................................lviveadrgtdlgtvardnvdwqtakelkehyaeeqykwlmmysqnaaaaqdgtgaglmaaanglqgsavggmgppnqhhmqepnagelkpklikrlaqsheihalrdkegneakakrvcmqkvkehglnmeildaefqmdwkkltfyyfadsyinfnslvtdlfkiyktriwmsainpasfasptlgiqapsgvgpgavgvgrgannserRSAQQQQQQQQDQQGGGFSgpgpagRGFPNSFTPPFGGERPGGPAG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      79.79|      19|      19|      67|      85|       2
---------------------------------------------------------------------------
   67-   85 (34.67/17.23)	TQPQKPVRRAS.......WLNDTTQP
   87-  101 (25.58/10.69)	PRPRK....GS.......FASSSMSP
  128-  151 (19.53/ 6.34)	..GRAPVSGGSftwgtgiWNNERKDP
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     134.79|      42|     197|     629|     675|       4
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  633-  675 (74.45/46.18)	GMGPPN..QHHM....QEPNAGELK..PKLIKRL.......AQSHEIHAlRDKEGNEA
  819-  875 (60.35/26.05)	GYGQPNypYSHMggmgSAPRPGNMPyvPGVVPSLdsysfpgAADYQIRS.RFPPGTEA
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.55|      16|     149|     571|     586|       5
---------------------------------------------------------------------------
  568-  583 (27.58/19.84)	DRGTDL.GTVARDNVDW
  584-  600 (22.97/15.27)	QTAKELkEHYAEEQYKW
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07393 with Med15 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ESVPEESDFAIDELDEANDGNEMAAKRALGRRMSEYGASGFRSPY
2) GAADYQIRSRFPPGTEAGPHEPGGGPMNPQNDWHAAFQGLS
3) MSSGTGSASTAKPGPPSKQGQGAFSGVSNHALLLDKLNRRSTPDSEALASSDDEADSHRQEAPQQATQPQKPVRRASWLNDTTQPLPRPRKGSFASSSMSPTASHPSTPSAEGTAPWGTHSQSSGVMGRAPVSGGSFTWGTGIWNNERKDPPSRLSEVLPSPTSTMPPGSAGGSFFNTDGNYGQTSPAPRDSGPNAQIPFAIPLHPTPKTYRSQSYSVGQLEPDAPPAAMSGSTILGRGRAHGHSGLQHRPSRPSMLSEMSNDGGLLGKVKEVDDDDDESATESMQGSMHQSAEAKTIELLARENAMLRQQQQQQQQQQQQQQQQQQQQYQNRLRPRASTGAAYGLGNGYAL
4) SGVGPGAVGVGRGANNSERRSAQQQQQQQQDQQGGGFSGPGPAGRGFPNSFTPPFGGERPGGPAGGYGQPNYPYSHMGGMGSAPRPGNMPYVPGVVPS
354
859
1
754
398
899
352
851










Molecular Recognition Features






MoRF SequenceStartStop




1) HALLLDKL
30
37