<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07389

Description Uncharacterized protein
SequenceMSHPLPPEDSSVSASANNVVAVAIAKSKSSQNAARWAINNLLTRNSDSPALLLIHVKKQNDSSDIDSTDTNANGESYENETSKLIKTFSTYCTRKGFKQQAVVLEDNDVSKSLVQYITEKRINNIVLGVSSTGDVAKMVTESAPEFCSVYVVANDKLQSVRPATLDVENLSSPETTPPEVSVEHYKQDNDVRDDSCESPHDDKDFPEPSGAIVVAQDVTSNKLSENDEDATQPLSIKDSDAELKRLKHELKQTISMYKSACREAARAKRMVKEIHQWKQKEAPKYEQVRLAHEAALVLAKVEKVKCRAATEAAEKAKRLADIEAQRRLYAELKVKKDAAAKKRALNVLSKNDVRYRKYTLEEIEAATDKFSDSLMIGEGGYGPVYKGKLDHTAVAIKVLRSGGGAAAQGKRQYQQEIEVLSSMRHPNMVLLLGACPKYGCLVYEYMNYGSLEDRLFRKGNTPTIPWRVRFKIAAEIATGLLFLHNAKPEPLVHRDLKPANILLDRNYTCKISDVGLSRLVPAPVADNVSQYRMTAAAGTFCYIDPEYQQTGRLGVKSDVYSFGIMLLQIITARPPMGLTHQVEKAITAGAFKSILDPSVPDWPVEEALSFAKLALKCAELKKKDRPNLGSDVLPELNRLREFGKRKSSQGPVLNDMQVGEALITQ
Length665
PositionTail
OrganismDaucus carota subsp. sativus (Carrot)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> campanulids> Apiales> Apiaceae> Apioideae> Scandiceae> Daucinae> Daucus> Daucus sect. Daucus.
Aromaticity0.06
Grand average of hydropathy-0.448
Instability index43.98
Isoelectric point8.52
Molecular weight73597.01
Publications
PubMed=27158781

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07389
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     229.41|      73|     133|      12|      85|       1
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   12-   85 (112.23/72.13)	VSASANNVVAV.AIAKSK.SSQNAARWAINNLLTRNSDSPALLLIHVKKQNDSSDiDSTDTNANGESYENETSKLI
  139-  213 (117.19/71.42)	VTESAPEFCSVyVVANDKlQSVRPATLDVENLSSPETTPPEVSVEHYKQDNDVRD.DSCESPHDDKDFPEPSGAIV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     300.73|      98|     133|     412|     515|       2
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  412-  515 (155.76/139.10)	QYQQ..EIEVLSSMRHPNMVLL..LGACPKYGcLVYEYMNygSLEDRLFRKGNTPTIP.WRVRFKIA.AEIATGLLFLHNaKPEPLVHRDLKPA.NILldRNYTCKISDVG
  546-  650 (144.97/105.88)	EYQQtgRLGVKSDVYSFGIMLLqiITARPPMG.LTHQVEK..AITAGAFKSILDPSVPdWPVEEALSfAKLALKCAELKK.KDRPNLGSDVLPElNRL..REFGKRKSSQG
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     111.17|      41|      47|     261|     307|       3
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  261-  307 (56.64/48.94)	CREAARAKRMVkEIHQWKQkeapKYEQVRLAHEA.....AL.VLAKvEKVKCR
  310-  356 (54.53/30.69)	TEAAEKAKRLA.DIEAQRR....LYAELKVKKDAaakkrALnVLSK.NDVRYR
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07389 with Med32 domain of Kingdom Viridiplantae
Unable to open file!