<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07362

Description Uncharacterized protein
SequenceMSISVNASAPAPAPPTITTDNATNGNTNMNATGTKTPEKEQEKAATPSTTSKLEAEIEQLQALATRLRAVRSAPASLAMDDITRTLSDKTRNALGELQGLRDALLSVDAQGALAAAAASEKADRSGIRGGLRREARKRKRSITPETPQPYVAPRAPSIFPTPTPTPPPTTITSVPQLVRDFNAKHGRTAQMRLCMPSGRTPPATSPPILLRVRLPDVLTAYITLDIPSSEDGSSKPLRDRTLTVAHVAIFGARERLPPHSQSAFLVFQKMSQHILSMVQSAPTVPPGVLADMLVTYQGVFSASCVACERILSQEGYLPPIARIWREPNGDGAGSWESRHVTCMQR
Length345
PositionTail
OrganismPeniophora sp. CONT
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Agaricomycotina> Agaricomycetes> Russulales> Peniophoraceae> Peniophora> unclassified Peniophora.
Aromaticity0.03
Grand average of hydropathy-0.343
Instability index59.09
Isoelectric point9.75
Molecular weight37006.82
Publications
PubMed=26659563

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07362
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      93.46|      30|      35|      46|      75|       1
---------------------------------------------------------------------------
   46-   75 (46.44/30.31)	TPSTTSKLEAEIEQLQALATRLRAVRSAPA
   83-  112 (47.02/30.77)	TRTLSDKTRNALGELQGLRDALLSVDAQGA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.72|      17|     269|       3|      20|       4
---------------------------------------------------------------------------
    3-   20 (25.85/15.36)	ISVNASAPApAPPTITTD
  275-  291 (30.87/14.00)	LSMVQSAPT.VPPGVLAD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      73.74|      22|      29|     188|     213|       5
---------------------------------------------------------------------------
  188-  213 (34.23/27.01)	TAQMRLCMPSgrTPPATSPPilLRVR
  219-  240 (39.52/19.44)	TAYITLDIPS..SEDGSSKP..LRDR
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07362 with Med27 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) DAQGALAAAAASEKADRSGIRGGLRREARKRKRSITPETPQPYVAPRAPSIFPTPTPTPPPTTITSVPQLVRDFN
2) MSISVNASAPAPAPPTITTDNATNGNTNMNATGTKTPEKEQEKAATPSTTSKLEAEIEQLQALATRLRAVRSAPASLAMDDITRTLSDKTRNALGELQGLRD
108
1
182
102










Molecular Recognition Features






MoRF SequenceStartStop




NANANA