<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07360

Description Uncharacterized protein
SequenceMSSVHRGGAGNSQNADMVAVAIDKDKGSQHALKWAVDNLLGKGKAVTLLHVKQPKSASGSGTNLDAAKSPADKEFFLPFRCFCTRKDIKVSEVLVEDTDVARGICEFLSANLIQNLVLGSPTRGIVSTKFKASDIASSVSKAAPEFCNVYIIAKGKISSLRSATSSPGPNSRLHMQHSQSSHNSPSFNHLDARFTPSTRVSDQRIPFAPRHNSEDLDIKSPFTRGNISNKSYGDLPDCDISFVSSGRPSTDRMSDDFGSRLSCGSDTENRLSFGSAFNSNEGLNSTSLSLDSSPSHKVDDVEAEMRRLKLELKQTMDMYSSACKEALSAKQKAMELHRWKMEEEARLEEARQAEEAALAIAEQEKAKCRAAMEAAEAAQRLAKMEAQKRISAEMKALKEAEEKKKYMSTLAHNDTRYRKYSIDEIEAATEFFNQSRKIGEGGYGPVYKCYLDHTPVAVKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLEDRLFRQGNSPVLSWQQRFRIAAEIATGLLFLHQSKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQIITARPPMGLTHHVERALERGTISDILDPEVTDWPLEEAEAFARISLKCAELRRKDRPDLGRDVLPLLERLRQLAEDSLPNIDMIYNMGMGGGRSSASSNSSMSTRTQDQIASHVSNE
Length745
PositionTail
OrganismDaucus carota subsp. sativus (Carrot)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> campanulids> Apiales> Apiaceae> Apioideae> Scandiceae> Daucinae> Daucus> Daucus sect. Daucus.
Aromaticity0.06
Grand average of hydropathy-0.451
Instability index46.17
Isoelectric point6.83
Molecular weight82308.28
Publications
PubMed=27158781

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07360
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     189.08|      47|      49|     197|     245|       1
---------------------------------------------------------------------------
  167-  194 (36.09/18.51)	............PGPNSR.LHMQ..HSQSSHNSPSFNHL...DARF...
  199-  245 (83.29/57.12)	RVSDQRI..PFAPRHNSEDLDIKSPFTRGNISNKSYGDLPDCDISFVSS
  247-  293 (69.70/40.78)	RPSTDRMsdDFGSRL.SCGSDTENRLSFGSAFNSNEG.LNSTSLSLDSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.35|      14|     350|     142|     155|       3
---------------------------------------------------------------------------
  142-  155 (28.06/17.43)	AAPEF.CNVY.IIAKG
  493-  508 (22.29/12.51)	ACPEYgCLVYeYMANG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.86|      15|      42|     323|     346|       4
---------------------------------------------------------------------------
  323-  337 (26.58/11.35)	CKEALSAKQKAMELH
  368-  382 (23.28/21.79)	CRAAMEAAEAAQRLA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     113.10|      38|     365|      79|     119|       8
---------------------------------------------------------------------------
   79-  119 (57.21/55.02)	FRCFCTRKDIKVsEVLVEDTDVARGI....CEFLS....ANLIqnLVLG
  447-  492 (55.90/41.13)	YKCYLDHTPVAV.KVLRPDAAQGRSQfqqeVEVLScirhPNMV..LLLG
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07360 with Med32 domain of Kingdom Viridiplantae
Unable to open file!