<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07358
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MAELGQETVKLSTLVKRTAEESFVSLTELVGKCKETELSDSEKKISLLKYVVKTQQRLLRLNVLAKWCQQVSLIQYSQQLASTLSSHDTCFTQAADSLFFMHEGLQQARAPIYDVPSTIEIFLTGSYQRLPKCVEDVGLQSILTDNQQKPALKKLDTLVRSKLLEVSLPKEISEVKVSDGTALVCVDGEFKVLVTLGYRGHLSMWRILHMELLVGESSGPVKLEEVRRHILGDDLERRMAAADNPFVTLYSVLHELCVVLVMDTVTRQVQALRQGRWKDVIRFELISDSNLGKGGKSVSQTSQDGETDSNVLRTPGLKIIYWLDLDKNPGAPDVGSSPFIIIEPGPDLQIKCLHSSFVVDPLTDKEAELSLDQSCIDVEKLLLRAICCNRYTRLLEIYKELGSNDLICRAADDVLLCSQEDEPDAGDKQKDDQFNAKGQEVLRVRAYGSSYFTLRINIRSGRFLLHSSGNMLASSTLSDFEESLNNGTMTAANVFVSLKSRSILHLFACIGRFLGLQVYDQGNSAVRVPKNILSGSTMLVMGFPECGNSYFLLMQLDEDFKPLFKLLETQPDLFGKAQSFVDLNNVIRMKNIDMGMMHILEDDLNLSLHKSAKLLAQVNNMGALQTPAKGLLSEFSTRAPKFDSVPPSSFSSVVDEVFELERGSSTPYSVQSPNSMFNNSPASVVGSVTRSFHGMQAGTSPKWEAGSQITDLPKVANINPNHSNLPYLSRNLMDLSQSSSASVLSSGPGKSAPVKKLSASKSDQDIPSLRSPFAAELGPYNRIDADHISCGNQSARLSRQPVLQTSTLSAKTNASTNSLPVGTAAGSLYVSGSRSLVTTTLSKGPDPAIISSPSLDIVPRQEKGLGKRTLSDMFNLIPSLRFSDVSKRSSKRRKLTESSLIHQPSSQMVTTAIGRTDAYNYAEVVAEANKGNSASNVYVSALLQVVSHCSLCIKHAQLTSQMEALDIPYVEEIGLRTVSSKLWFRLPSLREDTWRNICLRLGRLGSMHWDVKINDKHFRDLWDLQRGSNSTSWGSDVRIANTSDIDSHICYDAEGVILSYNSVEADSIKKLVADIQRLYNSRMFALGMRKLLGASSNEKFEDSAQLSDATVSAGVKSTGEVVNKSLEYVRRSFRIEAVGLMSLWFSYGSGALARFVVEWESGKKGCTMHVTPDQLWPHTKFLEDFINGAEVAPLLDCIRLTAGPLHALAAATCPARASPVSGVPGVASSNPTVSKQIGYNPSQGPTSSGTNFGQVSSGLGGNTGAFTNPGAHSTQNLHTAAMLAAVAAAGRSTPGVVPSSLLPIDVSVVLRGPYWIRIIYRKNFAVDMRCYAGDQVWLQPATPPKGGPSAGGSLPCPQFRPFIMEHVAQELNGLDPNFPGIQQAGDLGNSNYSGLGPGPQLLANNGNRAGIPGSTEISHLGNQVNGLSRVGNSLSASSNLASPGLPLCRPTGVPANVRGELNTAIIGLGDDGGYGGGWVPLVALKKVLRGILKYLGVLWLFAQLPDLLKEILGSILKDNEGALLNLDQEQPALRFFVGGYVFAVSVHRVQLLLQVLSVKRFHSQQQQQNPAIAELTQSEIGEICDYFSRRVASEPYDASRVASFITLLTLPVSVLREFLKLIAWKKGLAQAPVGETAPTQKSRIELCLENHSGLDMHGNPGNTSSSKSNIQYDRPRNSVDFGLTVVLDQAHMPHLNAAGGAAWLPYCVSVRLRYSFGEKPNVSFLGMEGSHGGRACWQRLDDWDKCEQRVIRTVEMNGSSTGELNQGRLKLIADNVQKTLQACLQGLKDGSANF |
Length | 1794 |
Position | Tail |
Organism | Daucus carota subsp. sativus (Carrot) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
asterids> campanulids> Apiales> Apiaceae> Apioideae> Scandiceae> Daucinae>
Daucus> Daucus sect. Daucus.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.163 |
Instability index | 43.09 |
Isoelectric point | 7.66 |
Molecular weight | 195300.23 |
Publications | PubMed=27158781
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP07358
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 410.12| 104| 108| 667| 770| 2
---------------------------------------------------------------------------
526- 650 (122.43/72.05) ...VR.VPKNILSGSTMLVMGfpeCGNS.YFLL.MQLDE.DFKplfklLETQPDLfgkaqsfVDLNNVIRMKNIDMGMMHI.LEDDL..NLSLHKSAKLLAQVNNMGAlqtPAKGLlsefstRAPK...FD..SVPPSSF
667- 770 (173.14/105.31) PYSVQ.SPNSMFNNSPASVVG...SVTR.SFHG.MQAGT.SPK.....WEAGSQI.......TDLPKVANINPNHSNLPYL.SRNLM..DLSQSSSASVLSSGPGKSA...PVKKL......SASK...SD..QDIPSLR
772- 881 (114.56/66.89) PFAAElGPYNRIDADHISCGN...QSARlSRQPvLQTSTlSAK.....TNAST.........NSLP....VGTAAGSLYVSgSRSLVttTLSKGPDPAIISSPSLDIV...PRQEK......GLGKrtlSDmfNLIPSLR
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 89.91| 27| 30| 1379| 1407| 3
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1379- 1406 (45.07/22.53) PGIQQAGDLGNsNYSGLGPGPQLLANNG
1412- 1438 (44.85/19.24) PGSTEISHLGN.QVNGLSRVGNSLSASS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 120.52| 38| 222| 64| 154| 4
---------------------------------------------------------------------------
97- 136 (66.59/120.46) SLFFMHEGL.QQARApiYDVPSTIEIFL.TGSYQ...RLPKCVED
950- 992 (53.92/10.99) SLCIKHAQLtSQMEA..LDIPYVEEIGLrTVSSKlwfRLPSLRED
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 110.94| 39| 146| 10| 50| 6
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10- 50 (57.83/47.12) KLSTLVKRTAEEsfVSLTELVGKCKETELS.....DSEKKISL.LKY
154- 198 (53.12/35.90) KLDTLVRSKLLE..VSLPKEISEVKVSDGTalvcvDGEFKVLVtLGY
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 90.85| 28| 626| 447| 479| 7
---------------------------------------------------------------------------
447- 479 (44.96/46.71) YGSSYFTLRInirsgRFLLHSSGN..MLASSTLSD
1079- 1108 (45.89/33.30) YNSRMFALGM.....RKLLGASSNekFEDSAQLSD
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