<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07354

Description Uncharacterized protein
SequenceMALETSTVLVALEEKLQSLRDLHNRLQAIHVGSTFSSLLRQPSAIGLTFNEPLERKVESLKEVGAFLKSEKVQDALKAAGESEKADKSELTMSWRRENRKRRRAPSPESPQPYHSFQTKSTSLFPLLENESTPLKVDDLALYIREFNLNPDHSQCKLHIWSPVRSGNKKIGNPAVIRFSIRDVLTAYVTTSHDPDTRVLVVETVTAFGPREKKSPHSQSEYMVYQKLSQQIARMLQSHPMVCFQTIVGLLVSYEGLFTQQCTTCQRVLSAEGHVPPVARLWIECSSGPEVGKEDVNWQPRHVTCLQS
Length307
PositionTail
OrganismNeolentinus lepideus HHB14362 ss-1
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Agaricomycotina> Agaricomycetes> Gloeophyllales> Gloeophyllaceae> Neolentinus.
Aromaticity0.07
Grand average of hydropathy-0.432
Instability index59.62
Isoelectric point8.68
Molecular weight34663.17
Publications
PubMed=26659563

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07354
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.83|      20|      39|      12|      31|       1
---------------------------------------------------------------------------
   12-   31 (32.96/24.68)	LEEKLQSLRDLHNRLQAIHV
   53-   72 (30.87/22.69)	LERKVESLKEVGAFLKSEKV
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07354 with Med27 domain of Kingdom Fungi
Unable to open file!