<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07326

Description Uncharacterized protein
SequenceMGITGLARWSNSNQQDLDIVCQRIVRTGGVHRGRWLLLMRTYRSTAATSSGTRGERIMHTVTPMGAADPCTYVWLEDGSVPSRGEYRSQLAEKGAEEAARSRMAMLKDEEPAHFRTTFVTLKPPNSLDMLLMNLRASWIPGRQIGEREAWNRAWQAAGNAPHLTLDGFIFHIGSDWIVRVGNLSSPAGGAKGMILEAEYLPLVHMPTREDGDVTKLNDFLSSFLAGLFPASPGARRTVAALEENLWVEASAEDIFENLYVVDEQREKVEVHVNGVSESQKDKAEGESMEVDKPLETPVEEEKAWAEGGKAEEEAVLADAGDEKPTEDETMEEEQDVELTEDDWVYGTDTVPPPDRLDWVGAEKDRRSAFSIMFVLRRENIL
Length381
PositionHead
OrganismCalocera cornea HHB12733
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Agaricomycotina> Dacrymycetes> Dacrymycetales> Dacrymycetaceae> Calocera.
Aromaticity0.07
Grand average of hydropathy-0.495
Instability index46.41
Isoelectric point4.69
Molecular weight42491.06
Publications
PubMed=26659563

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07326
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      88.07|      24|      41|     284|     307|       1
---------------------------------------------------------------------------
  284-  307 (42.39/27.51)	EGESMEVDKPLETPVEEEKAWAEG
  311-  328 (21.63/10.34)	EEEAVLADAGDEKPTEDE......
  330-  346 (24.05/12.34)	....MEEEQDVEL...TEDDWVYG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.03|      17|      41|     123|     139|       2
---------------------------------------------------------------------------
  123-  139 (31.11/27.07)	PPNSLDMLLMNLRASWI
  161-  177 (31.93/28.00)	PHLTLDGFIFHIGSDWI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      67.74|      22|      41|      35|      56|       3
---------------------------------------------------------------------------
   35-   56 (39.16/21.52)	WL....LLMR.TYRSTAATSSGTRGER
   74-  100 (28.57/14.12)	WLedgsVPSRgEYRSQLAEKGAEEAAR
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07326 with Med20 domain of Kingdom Fungi
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